Structural Classification of Proteins
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Superfamily: LigT-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: LigT-like [55143]
    duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III
  4. Superfamily: LigT-like [55144]
    link to SUPERFAMILY database - Superfamily

Families:

  1. tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase [55145] (1)
    1. tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase [55146]
      1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [55147] (3) picpic
  2. 2'-5' RNA ligase LigT [89967] (1)
    1. 2'-5' RNA ligase LigT [89968]
      1. Thermus thermophilus [TaxId: 274] [89969] (1) picpic
        TT0787
  3. 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain [103043] (1)
    1. 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain [103044]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [103045] (1) picpic
  4. Atu0111-like [143484] (1)
    1. Putative phosphoesterase Atu0111 [143485]
      1. Agrobacterium tumefaciens [TaxId: 358] [143486] (1) picpic
        SQ Q8UJ27 6-237

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk