Structural Classification of Proteins
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Fold: Dodecin subunit-like

beta-alpha-beta(2); 2 layers: alpha/beta; antiparallel beta-sheet: order 132

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Dodecin subunit-like [88797]
    beta-alpha-beta(2); 2 layers: alpha/beta; antiparallel beta-sheet: order 132

Superfamilies:

  1. Dodecin-like [89807] (1)
    link to SUPERFAMILY database - Superfamily
    1. Dodecin-like [89808] (2) picpic
      Subunit assembly and a probable biological unit is a dodecamer, hence the name
  2. Amyloid beta a4 protein copper binding domain (domain 2) [89811] (1)
    link to SUPERFAMILY database - Superfamily
    1. Amyloid beta a4 protein copper binding domain (domain 2) [89812] (1) picpic
  3. N-terminal, heterodimerisation domain of RBP7 (RpoE) [88798] (1)
    link to SUPERFAMILY database - Superfamily
    1. N-terminal, heterodimerisation domain of RBP7 (RpoE) [88799] (3) picpic
  4. D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain [117778] (1)
    link to SUPERFAMILY database - Superfamily
    1. D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain [117779] (1) picpic
  5. YbjQ-like [117782] (1)
    pentamer, beta/alpha-propeller; additional short beta-strands promote oligomeric assembly
    link to SUPERFAMILY database - Superfamily
    1. YbjQ-like [117783] (2) picpic
      Pfam 01906; DUF 74, UPF0145
  6. YdgH-like [159871] (1)
    extra N-terminal structures: short strand and short helix; topological similarity to the YbjQ-like superfamily
    1. YdgH-like [159872] (2) picpic
      Pfam 07338; DUF1471
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk