Structural Classification of Proteins
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Family: Dodecin-like

Subunit assembly and a probable biological unit is a dodecamer, hence the name

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Dodecin subunit-like [88797]
    beta-alpha-beta(2); 2 layers: alpha/beta; antiparallel beta-sheet: order 132
  4. Superfamily: Dodecin-like [89807]
    link to SUPERFAMILY database - Superfamily
  5. Family: Dodecin-like [89808]
    Subunit assembly and a probable biological unit is a dodecamer, hence the name

Protein Domains:

  1. Flavin-binding protein dodecin [89809]
    1. Archaeon Halobacterium salinarum [TaxId: 2242] [89810] (12)
      1. 2cc6 picpic
        automatically matched to d1moga_
        complexed with cl, lum, mg, na, so4
        1. region a:2-65 [130218] picpiclink
      2. 2cc9 picpic
        automatically matched to d1moga_
        complexed with cl, mg, na, so4
        1. region a:2-65 [130221] picpiclink
      3. 2vkf picpic
        complexed with cf2, cl, mg, na, so4; mutant
        1. region a:2-63 [153223] picpiclink
      4. 1mog picpic
        complexed with cl, mg, na, rbf
        1. chain a [85034] picpiclink
      5. 2ccc picpic
        automatically matched to d1moga_
        complexed with cl, lfn, mg, na, so4
        1. region a:2-65 [130227] picpiclink
      6. 2vkg picpic
        automatically matched to 2VKF A:2-63
        complexed with cf4, cl, mg, na, so4; mutant
        1. region a:2-63 [153224] picpiclink
      7. 2ccb picpic
        automatically matched to d1moga_
        complexed with cl, mg, na, rbf, so4
        1. region a:2-65 [130226] picpiclink
      8. 2cc7 picpic
        automatically matched to d1moga_
        complexed with cl, lum, mg, na, so4
        1. region a:2-65 [130219] picpiclink
      9. 2cie picpic
        automatically matched to d1moga_
        complexed with cl, fad, mg, na, so4
        1. region a:2-65 [130488] picpiclink
      10. 2cc8 picpic
        automatically matched to d1moga_
        complexed with cl, mg, na, rbf, so4
        1. region a:2-65 [130220] picpiclink
      11. 2cjc picpic
        automatically matched to d1moga_
        complexed with cl, fad, mg, na, so4
        1. region a:2-65 [130525] picpiclink
      12. 2cif picpic
        automatically matched to d1moga_
        complexed with cl, fad, mg, na, so4
        1. region a:2-65 [130489] picpiclink
  2. Uncharacterized protein TTHA1431 [159869]
    1. Thermus thermophilus [TaxId: 274] [159870] (62)
      SQ Q5SIE3 2-67! SQ Q5SIE3 2-68
      1. 2ux9 picpic
        complexed with coa, fmn, na, po4; mutant
        1. region a:2-67 [152258] picpiclink
      2. 2ux9 picpic
        automatically matched to 2UX9 A:2-67
        complexed with coa, fmn, na, po4; mutant
        1. region b:2-67 [152259] picpiclink
      3. 2ux9 picpic
        automatically matched to 2UX9 A:2-67
        complexed with coa, fmn, na, po4; mutant
        1. region c:2-67 [152260] picpiclink
      4. 2ux9 picpic
        automatically matched to 2UX9 A:2-67
        complexed with coa, fmn, na, po4; mutant
        1. region d:2-67 [152261] picpiclink
      5. 2ux9 picpic
        automatically matched to 2UX9 A:2-67
        complexed with coa, fmn, na, po4; mutant
        1. region e:2-67 [152262] picpiclink
      6. 2ux9 picpic
        automatically matched to 2UX9 A:2-67
        complexed with coa, fmn, na, po4; mutant
        1. region f:2-67 [152263] picpiclink
      7. 2cz8 picpic
        complexed with fad, k, po4
        1. region a:2-68 [146432] picpiclink
      8. 2cz8 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fad, k, po4
        1. region b:3-68 [146433] picpiclink
      9. 2cz8 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fad, k, po4
        1. region c:2-68 [146434] picpiclink
      10. 2cz8 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fad, k, po4
        1. region d:2-68 [146435] picpiclink
      11. 2cz8 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fad, k, po4
        1. region e:2-68 [146436] picpiclink
      12. 2cz8 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fad, k, po4
        1. region f:3-68 [146437] picpiclink
      13. 2cz8 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fad, k, po4
        1. region g:2-68 [146438] picpiclink
      14. 2cz8 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fad, k, po4
        1. region h:2-68 [146439] picpiclink
      15. 2deg picpic
        automatically matched to 2CZ8 A:2-68
        complexed with gol, mn, na
        1. region a:2-68 [146492] picpiclink
      16. 2deg picpic
        automatically matched to 2CZ8 A:2-68
        complexed with gol, mn, na
        1. region b:2-68 [146493] picpiclink
      17. 2deg picpic
        automatically matched to 2CZ8 A:2-68
        complexed with gol, mn, na
        1. region c:2-68 [146494] picpiclink
      18. 2deg picpic
        automatically matched to 2CZ8 A:2-68
        complexed with gol, mn, na
        1. region d:2-68 [146495] picpiclink
      19. 2deg picpic
        automatically matched to 2CZ8 A:2-68
        complexed with gol, mn, na
        1. region e:2-68 [146496] picpiclink
      20. 2deg picpic
        automatically matched to 2CZ8 A:2-68
        complexed with gol, mn, na
        1. region f:2-68 [146497] picpiclink
      21. 2v21 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fmn, na
        1. region a:2-68 [152413] picpiclink
      22. 2v21 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fmn, na
        1. region b:2-68 [152414] picpiclink
      23. 2v21 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fmn, na
        1. region c:2-68 [152415] picpiclink
      24. 2v21 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fmn, na
        1. region d:2-68 [152416] picpiclink
      25. 2v21 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fmn, na
        1. region e:2-68 [152417] picpiclink
      26. 2v21 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with fmn, na
        1. region f:2-68 [152418] picpiclink
      27. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region a:2-68 [152384] picpiclink
      28. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region b:2-68 [152385] picpiclink
      29. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region c:2-68 [152386] picpiclink
      30. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region d:2-68 [152387] picpiclink
      31. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region e:2-68 [152388] picpiclink
      32. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region f:2-68 [152389] picpiclink
      33. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region g:2-68 [152390] picpiclink
      34. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region h:2-68 [152391] picpiclink
      35. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region i:2-68 [152392] picpiclink
      36. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region j:2-68 [152393] picpiclink
      37. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region k:2-68 [152394] picpiclink
      38. 2v18 picpic
        automatically matched to 2CZ8 A:2-68
        complexed with coa, fmn
        1. region l:2-68 [152395] picpiclink
      39. 2v19 picpic
        complexed with cl, coa, fmn; mutant
        1. region a:2-68 [152396] picpiclink
      40. 2deh picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, na
        1. region a:2-68 [146498] picpiclink
      41. 2deh picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, na
        1. region b:2-68 [146499] picpiclink
      42. 2deh picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, na
        1. region c:2-68 [146500] picpiclink
      43. 2deh picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, na
        1. region d:2-68 [146501] picpiclink
      44. 2deh picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, na
        1. region e:2-68 [146502] picpiclink
      45. 2deh picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, na
        1. region f:2-68 [146503] picpiclink
      46. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region b:2-68 [152397] picpiclink
      47. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region c:2-68 [152398] picpiclink
      48. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region d:2-68 [152399] picpiclink
      49. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region e:2-68 [152400] picpiclink
      50. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region f:2-68 [152401] picpiclink
      51. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region g:2-68 [152402] picpiclink
      52. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region h:2-68 [152403] picpiclink
      53. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region i:2-68 [152404] picpiclink
      54. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region j:2-68 [152405] picpiclink
      55. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region k:2-68 [152406] picpiclink
      56. 2v19 picpic
        automatically matched to 2V19 A:2-68
        complexed with cl, coa, fmn; mutant
        1. region l:2-68 [152407] picpiclink
      57. 2dev picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, cs, na
        1. region a:2-68 [146504] picpiclink
      58. 2dev picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, cs, na
        1. region b:2-68 [146505] picpiclink
      59. 2dev picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, cs, na
        1. region c:2-68 [146506] picpiclink
      60. 2dev picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, cs, na
        1. region d:2-68 [146507] picpiclink
      61. 2dev picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, cs, na
        1. region e:2-68 [146508] picpiclink
      62. 2dev picpic
        automatically matched to 2CZ8 A:2-68
        complexed with cl, cs, na
        1. region f:2-68 [146509] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk