Structural Classification of Proteins
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Superfamily: YdgH-like

extra N-terminal structures: short strand and short helix; topological similarity to the YbjQ-like superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Dodecin subunit-like [88797]
    beta-alpha-beta(2); 2 layers: alpha/beta; antiparallel beta-sheet: order 132
  4. Superfamily: YdgH-like [159871]
    extra N-terminal structures: short strand and short helix; topological similarity to the YbjQ-like superfamily

Families:

  1. YdgH-like [159872] (2)
    Pfam 07338; DUF1471
    1. Hypothetical protein STM0082 [159873]
      1. Salmonella typhimurium [TaxId: 90371] [159874] (2)
        SQ Q7CR88 1-96
        1. 2jna picpic
          1. region a:1-96 [148146] picpiclink
        2. 2jna picpic
          automatically matched to 2JNA A:1-96
          1. region b:201-296 [148147] picpiclink
    2. Putative periplasmic protein YahO [159875]
      SCH_0407
      1. Salmonella choleraesuis [TaxId: 28901] [159876] (1)
        SQ Q57SJ8 1-91
        1. 2noc picpic
          1. region a:1-91 [148323] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk