Structural Classification of Proteins
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Fold: Nucleocapsid protein dimerization domain

dimer of alpha-beta(2)-alpha motifs ; 2 layers, alpha/beta

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Nucleocapsid protein dimerization domain [103067]
    dimer of alpha-beta(2)-alpha motifs ; 2 layers, alpha/beta

Superfamilies:

  1. Nucleocapsid protein dimerization domain [103068] (2)
    link to SUPERFAMILY database - Superfamily
    1. Arterivirus nucleocapsid protein [103069] (2)
      1. Arterivirus nucleocapsid protein [103070]
        1. PRRSV (Porcine reproductive and respiratory syndrome virus) [TaxId: 28344] [103071] (1) picpic
        2. Equine arteritis virus [TaxId: 11047] [160463] (4) picpic
          SQ Q66526 50-105
    2. Coronavirus nucleocapsid protein [143508] (2)
      C-terminal part of Pfam 00937
      1. Coronavirus nucleocapsid protein [143509]
        1. Avian infectious bronchitis virus [TaxId: 11120] [143510] (12) picpic
          SQ P32923 222-333! SQ P32923 226-332! SQ Q4ZJS4 218-326
          different strains
        2. SARS coronavirus [TaxId: 227859] [143511] (12) picpic
          SQ P59595 270-366
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk