Structural Classification of Proteins
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Superfamily: Nucleocapsid protein dimerization domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Nucleocapsid protein dimerization domain [103067]
    dimer of alpha-beta(2)-alpha motifs ; 2 layers, alpha/beta
  4. Superfamily: Nucleocapsid protein dimerization domain [103068]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Arterivirus nucleocapsid protein [103069] (2)
    1. Arterivirus nucleocapsid protein [103070]
      1. PRRSV (Porcine reproductive and respiratory syndrome virus) [TaxId: 28344] [103071] (1) picpic
      2. Equine arteritis virus [TaxId: 11047] [160463] (4) picpic
        SQ Q66526 50-105
  2. Coronavirus nucleocapsid protein [143508] (2)
    C-terminal part of Pfam 00937
    1. Coronavirus nucleocapsid protein [143509]
      1. Avian infectious bronchitis virus [TaxId: 11120] [143510] (12) picpic
        SQ P32923 222-333! SQ P32923 226-332! SQ Q4ZJS4 218-326
        different strains
      2. SARS coronavirus [TaxId: 227859] [143511] (12) picpic
        SQ P59595 270-366
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk