Structural Classification of Proteins
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Fold: Ribosome binding domain-like

beta-(2)-alpha(2)-beta(2); 2 layers: beta/alpha; antiparallel beta-sheet: order 1243; topological similarity to the common core of ribosomal proteins L23 and L15e

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ribosome binding domain-like [100965]
    beta-(2)-alpha(2)-beta(2); 2 layers: beta/alpha; antiparallel beta-sheet: order 1243; topological similarity to the common core of ribosomal proteins L23 and L15e

Superfamilies:

  1. Trigger factor ribosome-binding domain [102735] (1)
    link to SUPERFAMILY database - Superfamily
    1. Trigger factor ribosome-binding domain [102736] (2)
      1. Trigger factor ribosome-binding domain [102737]
        1. Escherichia coli [TaxId: 562] [102738] (4)
          SQ P22257
          1. 1p9y picpic
            complexed with acy; mutant
            1. chain a [94402] picpiclink
            2. chain b [94403] picpiclink
          2. 1oms picpic
            complexed with gol, pg4, so2, so4
            1. chain a [93350] picpiclink
            2. chain b [93351] picpiclink
            3. chain c [93352] picpiclink
          3. 1w26 picpicxrefxref
            1. region a:1-131 [109086] picpiclink
            2. region b:1-131 [109089] picpiclink
          4. 2vrh picpicxrefxrefxrefxrefxref
            automatically matched to d1w26a2
            1. region a:1-131 [153507] picpiclink
        2. Vibrio cholerae [TaxId: 666] [110787] (1)
          SQ Q9KQS5
          1. 1t11 picpicxrefxref
            1. region a:1-129 [106237] picpiclink
            2. region b:1-129 [106240] picpiclink
  2. Translation initiation factor 2 beta, aIF2beta, N-terminal domain [100966] (1)
    link to SUPERFAMILY database - Superfamily
    1. Translation initiation factor 2 beta, aIF2beta, N-terminal domain [100967] (2)
      1. Translation initiation factor 2 beta, aIF2beta, N-terminal domain [100968]
        1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [102739] (1)
          1. 1nee picpicxref
            complexed with zn
            1. region a:1-98 [91841] picpiclink
        2. Archaeon Methanococcus jannaschii [TaxId: 2190] [100969] (1)
          1. 1k8b picpic
            1. chain a [72171] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk