Structural Classification of Proteins
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Superfamily: YjbQ-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: YjbQ-like [111037]
    beta(2)-alpha-beta(2)-alpha(2)-beta(3); contains a beta-sandwich: 7 strands in 2 sheets; trimerizes with orthogonally packed beta-sheets
  4. Superfamily: YjbQ-like [111038]
    link to SUPERFAMILY database - Superfamily

Families:

  1. YjbQ-like [111039] (4)
    Pfam 01894
    1. B.subtilis YugU ortolog CAC0907 [111040]
      1. Clostridium acetobutylicum [TaxId: 1488] [111041] (2)
        SQ Q97KL0
        1. 1vmh picpic
          Structural genomics target
          complexed with na
          1. chain a [113677] picpiclink
        2. 1xbf picpic
          Structural genomics target
          complexed with so4
          1. chain a [109538] picpiclink
          2. chain b [109539] picpiclink
          3. chain c [109540] picpiclink
    2. Hypothetical protein BH3498 [118032]
      1. Bacillus halodurans [TaxId: 86665] [118033] (1)
        SQ Q9K772
        1. 1vmf picpic
          Structural genomics target
          complexed with act, edo, epe, na
          1. chain a [113673] picpiclink
          2. chain b [113674] picpiclink
          3. chain c [113675] picpiclink
    3. Hypothetical protein TM0723 [118034]
      1. Thermotoga maritima [TaxId: 2336] [118035] (1)
        SQ Q9WZI2
        1. 1vmj picpic
          Structural genomics target
          complexed with na, so4
          1. chain a [113679] picpiclink
    4. Hypothetical protein SSO2532 [118036]
      1. Sulfolobus solfataricus [TaxId: 2287] [118037] (1)
        SQ Q97VS8
        1. 1vph picpic
          Structural genomics target
          complexed with cl, edo, k, po4
          1. chain a [113955] picpiclink
          2. chain b [113956] picpiclink
          3. chain c [113957] picpiclink
          4. chain d [113958] picpiclink
          5. chain e [113959] picpiclink
          6. chain f [113960] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk