Structural Classification of Proteins

Superfamily: RNA bacteriophage capsid protein

: uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold: RNA bacteriophage capsid protein [55404]
6-standed beta-sheet followed with 2 helices; meander
Superfamily: RNA bacteriophage capsid protein [55405]
uperfamily

Families:

RNA bacteriophage capsid protein [55406] (5)
1. MS2 virus coat protein [55407]
  1. Bacteriophage MS2 [TaxId: 12022] [55408] (48)
    SQ P03612
    1. 2bu1
      automatically matched to d1dzsa_
      complexed with 5bu
      1. region a:1-129 [129164]
    2. 2bu1
      automatically matched to d1dzsa_
      complexed with 5bu
      1. region b:1-129 [129165]
    3. 2bu1
      automatically matched to d1dzsa_
      complexed with 5bu
      1. region c:1-129 [129166]
    4. 2c4q
      automatically matched to d1dzsa_
      complexed with pyo; mutant
      1. region a:1-129 [129842]
    5. 2c4q
      automatically matched to d1dzsa_
      complexed with pyo; mutant
      1. region b:1-129 [129843]
    6. 2c4q
      automatically matched to d1dzsa_
      complexed with pyo; mutant
      1. region c:1-129 [129844]
    7. 2izn
      automatically matched to d1dzsa_
      1. region a:1-129 [137823]
    8. 2izn
      automatically matched to d1dzsa_
      1. region b:1-129 [137824]
    9. 2izn
      automatically matched to d1dzsa_
      1. region c:1-129 [137825]
    10. 2c4z
      automatically matched to d1dzsa_
      complexed with sur; mutant
      1. region a:1-129 [129867]
    11. 2c4z
      automatically matched to d1dzsa_
      complexed with sur; mutant
      1. region b:1-129 [129868]
    12. 2c4z
      automatically matched to d1dzsa_
      complexed with sur; mutant
      1. region c:1-129 [129869]
    13. 2c51
      automatically matched to d1dzsa_
      mutant
      1. region a:1-129 [129873]
    14. 2c51
      automatically matched to d1dzsa_
      mutant
      1. region b:1-129 [129874]
    15. 2c51
      automatically matched to d1dzsa_
      mutant
      1. region c:1-129 [129875]
    16. 2c4y
      automatically matched to d1dzsa_
      complexed with sur; mutant
      1. region a:1-129 [129864]
    17. 2c4y
      automatically matched to d1dzsa_
      complexed with sur; mutant
      1. region b:1-129 [129865]
    18. 2c4y
      automatically matched to d1dzsa_
      complexed with sur; mutant
      1. region c:1-129 [129866]
    19. 1zdh
      protein/RNA complex
      1. chain a [40043]
      2. chain b [40044]
      3. chain c [40045]
    20. 1mst
      mutant
      1. chain a [40055]
      2. chain b [40056]
      3. chain c [40057]
    21. 1msc
      mutant
      1. chain a [40039]
    22. 1zdi
      protein/RNA complex
      1. chain a [40052]
      2. chain b [40053]
      3. chain c [40054]
    23. 1bms
      mutant
      1. chain a [40082]
      2. chain b [40083]
      3. chain c [40084]
    24. 1zdj
      protein/RNA complex
      1. chain a [40064]
      2. chain b [40065]
      3. chain c [40066]
    25. 1aq3
      protein/RNA complex; mutant
      1. chain a [40079]
      2. chain b [40080]
      3. chain c [40081]
    26. 2c50
      automatically matched to d1dzsa_
      mutant
      1. region a:1-129 [129870]
    27. 2c50
      automatically matched to d1dzsa_
      mutant
      1. region b:1-129 [129871]
    28. 2c50
      automatically matched to d1dzsa_
      mutant
      1. region c:1-129 [129872]
    29. 2iz9
      automatically matched to d1dzsa_
      complexed with one
      1. region a:1-129 [137820]
    30. 2iz9
      automatically matched to d1dzsa_
      complexed with one
      1. region b:1-129 [137821]
    31. 2iz9
      automatically matched to d1dzsa_
      complexed with one
      1. region c:1-129 [137822]
    32. 1mvb
      mutant
      1. chain a [40070]
      2. chain b [40071]
      3. chain c [40072]
    33. 2ms2
      1. chain a [40049]
      2. chain b [40050]
      3. chain c [40051]
    34. 1mva
      mutant
      1. chain a [40088]
      2. chain b [40089]
      3. chain c [40090]
    35. 5msf
      protein/RNA complex
      1. chain a [40058]
      2. chain b [40059]
      3. chain c [40060]
    36. 6msf
      protein/RNA complex
      1. chain a [40067]
      2. chain b [40068]
      3. chain c [40069]
    37. 1zdk
      protein/RNA complex
      1. chain a [40085]
      2. chain b [40086]
      3. chain c [40087]
    38. 1aq4
      protein/RNA complex; mutant
      1. chain a [40091]
      2. chain b [40092]
      3. chain c [40093]
    39. 1u1y
      complexed with 2pr
      1. chain a [112965]
      2. chain b [112966]
      3. chain c [112967]
    40. 2izm
      automatically matched to d1aq4a_
      1. region a:1-129 [147842]
    41. 2izm
      automatically matched to d1aq4a_
      1. region b:1-129 [147843]
    42. 2izm
      automatically matched to d1aq4a_
      1. region c:1-129 [147844]
    43. 7msf
      protein/RNA complex
      1. chain a [40061]
      2. chain b [40062]
      3. chain c [40063]
    44. 2iz8
      automatically matched to d1dzsa_
      1. region a:1-129 [137817]
    45. 2iz8
      automatically matched to d1dzsa_
      1. region b:1-129 [137818]
    46. 2iz8
      automatically matched to d1dzsa_
      1. region c:1-129 [137819]
    47. 2vtu
      automatically matched to d1aq4a_
      1. region j:130-257 [153542]
    48. 2vtu
      automatically matched to d1aq4a_
      1. region l:130-257 [153543]
2. GA coat protein [55409]
  1. Bacteriophage GA [TaxId: 12018] [55410] (2)
    1. 1una
      1. chain a [40094]
      2. chain b [40095]
    2. 1gav
      contains 9 more identical chains denoted "a b c d e f g h i"
      1. chain a [40096]
      2. chain b [40097]
      3. chain c [40098]
      4. chain d [40099]
      5. chain e [40100]
      6. chain f [40101]
      7. chain g [40102]
      8. chain h [40103]
      9. chain i [40104]
      10. chain j [40105]
      11. chain k [40106]
      12. chain l [40107]
      13. chain m [40108]
      14. chain n [40109]
      15. chain o [40110]
      16. chain p [40111]
      17. chain q [40112]
      18. chain r [40113]
      19. chain s [40114]
      20. chain t [40115]
      21. chain u [40116]
      22. chain v [40117]
      23. chain w [40118]
      24. chain x [40119]
      25. chain y [40120]
      26. chain z [40121]
      27. chain 1 [40122]
      28. chain 2 [40123]
      29. chain 3 [40124]
      30. chain 4 [40125]
      31. chain 5 [40126]
      32. chain 6 [40127]
      33. chain 7 [40128]
      34. chain 8 [40129]
      35. chain 9 [40130]
      36. chain 0 [40131]
3. fr coat protein [55411]
  1. Bacteriophage FR [TaxId: 12017] [55412] (2)
    1. 1fr5
      mutant
      1. chain a [40135]
      2. chain b [40136]
      3. chain c [40137]
    2. 1frs
      1. chain a [40132]
      2. chain b [40133]
      3. chain c [40134]
4. Qbeta coat protein [55413]
  1. Bacteriophage Qbeta [TaxId: 39803] [55414] (1)
    1. 1qbe
      1. chain a [40138]
      2. chain b [40139]
      3. chain c [40140]
5. PP7 coat protein [55415]
  1. Bacteriophage PP7 [TaxId: 12023] [55416] (1)
    1. 1dwn
      1. chain a [40141]
      2. chain b [40142]
      3. chain c [40143]