Structural Classification of Proteins
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Family: Reprolysin-like

Pfam 01421

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Zincin-like [55485]
    contains mixed beta sheet with connection over free side of the sheet
  4. Superfamily: Metalloproteases ("zincins"), catalytic domain [55486]
    link to SUPERFAMILY database - Superfamily
  5. Family: Reprolysin-like [55519]
    Pfam 01421

Protein Domains:

  1. Snake venom metalloprotease [55520]
    1. Eastern diamondback rattlesnake (Crotalus adamanteus), adamalysin II [TaxId: 8729] [55521] (4)
      1. 4aig picpic
        complexed with ca, flx, zn
        1. chain a [40318] picpiclink
      2. 1iag picpic
        complexed with ca, so4, zn
        1. chain a [40319] picpiclink
      3. 2aig picpic
        complexed with ca, fle, so4, zn
        1. chain p [40320] picpiclink
      4. 3aig picpic
        complexed with ca, fle, so4, tcr, zn
        1. chain a [40321] picpiclink
    2. Western diamonback rattlesnake (Crotalus atrox), atrolysin C [TaxId: 8730] [55522] (3)
      1. 1atl picpic
        complexed with ca, ch3, sle, zn
        1. chain a [40322] picpiclink
        2. chain b [40323] picpiclink
      2. 1htd picpic
        complexed with ca, zn
        1. chain a [40326] picpiclink
        2. chain b [40327] picpiclink
      3. 1dth picpic
        complexed with ca, dsx, zn
        1. chain a [40324] picpiclink
        2. chain b [40325] picpiclink
    3. Taiwan habu (Trimeresurus mucrosquamatus), atrolysin E [TaxId: 103944] [75495] (4)
      1. 1kuf picpic
        complexed with cd
        1. chain a [73007] picpiclink
      2. 1kug picpic
        complexed with cd
        1. chain a [73008] picpiclink
      3. 1kuk picpic
        complexed with cd
        1. chain a [73014] picpiclink
      4. 1kui picpic
        complexed with cd
        1. chain a [73009] picpiclink
    4. Five-pace snake (Agkistrodon acutus), acutolysin A [TaxId: 36307] [55523] (2)
      1. 1bsw picpic
        complexed with oc1, zn3
        1. chain a [40329] picpiclink
      2. 1bud picpic
        complexed with oc1, zn3
        1. chain a [40328] picpiclink
    5. Chinese five-pace snake (Agkistrodon acutus), acutolysin C [TaxId: 36307] [55524] (1)
      1. 1qua picpic
        complexed with zn
        1. chain a [40330] picpiclink
    6. Terciopelo (Bothrops asper), bap1 [TaxId: 8722] [103127] (1)
      1. 1nd1 picpic
        complexed with zn
        1. chain a [91808] picpiclink
    7. Habu (Trimeresurus flavoviridis), Trimerelysin II [TaxId: 88087] [111083] (1)
      SQ P20165
      1. 1wni picpic
        complexed with zn
        1. chain a [109435] picpiclink
  2. ADAM33 [118046]
    1. Human (Homo sapiens) [TaxId: 9606] [118047] (2)
      SQ Q9BZ11 204-409
      1. 1r55 picpic
        complexed with 097, ca, cl, man, nag, zn
        1. chain a [111694] picpiclink
      2. 1r54 picpic
        complexed with ca, cl, nag, zn
        1. chain a [111693] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk