Structural Classification of Proteins
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Family: Serralysin-like metalloprotease, catalytic (N-terminal) domain

characteristic HEXXHXXGXXH motif and Met located near C-terminus

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Zincin-like [55485]
    contains mixed beta sheet with connection over free side of the sheet
  4. Superfamily: Metalloproteases ("zincins"), catalytic domain [55486]
    link to SUPERFAMILY database - Superfamily
  5. Family: Serralysin-like metalloprotease, catalytic (N-terminal) domain [55508]
    characteristic HEXXHXXGXXH motif and Met located near C-terminus

Protein Domains:

  1. Metalloprotease [55509]
    the rest of protein is all-beta sandwich containing a parallel beta-helix
    1. Pseudomonas aeruginosa [TaxId: 287] [55510] (3)
      alkaline protease
      1. 1kap picpicxref
        complexed with ca, zn
        1. region p:1-246 [40298] picpiclink
      2. 1jiw picpicxrefxref
        complexed with ca, zn
        1. region p:1-246 [63080] picpiclink
      3. 1akl picpicxref
        complexed with ca, zn
        1. region a:1-246 [40299] picpiclink
    2. Serratia marcescens [TaxId: 615] [55511] (4)
      Serralysin
      1. 1sat picpicxref
        complexed with ca, zn
        1. region a:4-246 [40300] picpiclink
      2. 1af0 picpicxref
        complexed with ca, hma, zn
        1. region a:2-246 [40301] picpiclink
      3. 1srp picpicxref
        complexed with ca, zn
        1. region a:4-246 [40302] picpiclink
      4. 1smp picpicxrefxref
        complexed with ca, zn
        1. region a:4-246 [40303] picpiclink
    3. Erwinia chrysanthemi [TaxId: 556] [82735] (5)
      Protease C
      1. 1k7i picpicxref
        complexed with ca, zn; mutant
        1. region a:18-258 [77282] picpiclink
      2. 1k7q picpicxref
        complexed with ca, zn; mutant
        1. region a:18-258 [77284] picpiclink
      3. 1go8 picpicxref
        complexed with ca, po4, zn; mutant
        1. region p:20-258 [76248] picpiclink
      4. 1k7g picpicxref
        complexed with ca, po4, zn
        1. region a:25-258 [77280] picpiclink
      5. 1go7 picpicxref
        complexed with ca, po4, zn; mutant
        1. region p:18-258 [76246] picpiclink
    4. Pseudomonas sp., tac ii 18 [TaxId: 306] [82736] (8)
      psychrophilic alkaline protease
      1. 1g9k picpicxref
        complexed with ca, so4, zn
        1. region a:3-244 [76218] picpiclink
      2. 1om8 picpicxref
        complexed with ca, so4
        1. region a:3-244 [87076] picpiclink
      3. 1om6 picpicxref
        complexed with ca, so4
        1. region a:3-244 [87072] picpiclink
      4. 1h71 picpicxref
        complexed with ca, zn
        1. region p:3-244 [76705] picpiclink
      5. 1o0q picpicxref
        complexed with ca, so4
        1. region a:3-244 [86537] picpiclink
      6. 1o0t picpicxref
        complexed with ca, so4
        1. region a:3-244 [86545] picpiclink
      7. 1omj picpicxref
        complexed with ca, so4, zn
        1. region a:3-244 [87084] picpiclink
      8. 1om7 picpicxref
        complexed with ca, so4
        1. region a:3-244 [87074] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk