Structural Classification of Proteins
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Family: TrkA C-terminal domain-like

Pfam 02080

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: TrkA C-terminal domain-like [116725]
    beta-X-beta(2)-X-beta-alpha; pseudo barrel capped by helix at one end; topological similarity to the HPr-like fold
  4. Superfamily: TrkA C-terminal domain-like [116726]
    link to SUPERFAMILY database - Superfamily
  5. Family: TrkA C-terminal domain-like [116727]
    Pfam 02080

Protein Domains:

  1. Potassium channel-related protein MthK, C-terminal domain [116728]
    1. Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262] [116729] (9)
      1. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1lnqa4
        mutant
        1. region a:245-336 [134346] picpiclink
      2. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1lnqa4
        mutant
        1. region b:245-336 [134348] picpiclink
      3. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1lnqa4
        mutant
        1. region c:245-336 [134350] picpiclink
      4. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1lnqa4
        mutant
        1. region d:245-336 [134352] picpiclink
      5. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1lnqa4
        mutant
        1. region e:245-336 [134354] picpiclink
      6. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1lnqa4
        mutant
        1. region f:245-336 [134356] picpiclink
      7. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1lnqa4
        mutant
        1. region g:245-336 [134358] picpiclink
      8. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1lnqa4
        mutant
        1. region h:245-336 [134360] picpiclink
      9. 1lnq picpicxrefxref
        complexed with ca
        1. region a:245-336 [111577] picpiclink
        2. region b:245-336 [111579] picpiclink
        3. region c:245-336 [111581] picpiclink
        4. region d:245-336 [111583] picpiclink
        5. region e:245-336 [111585] picpiclink
        6. region f:245-336 [111587] picpiclink
        7. region g:245-336 [111589] picpiclink
        8. region h:245-336 [111591] picpiclink
  2. Hypothetical protein PH0236, C-terminal domain [143625]
    1. Pyrococcus horikoshii [TaxId: 53953] [143626] (4)
      SQ O57975 108-201
      1. 1vct picpicxref
        complexed with cl, edo, na
        1. region a:108-201 [119987] picpiclink
      2. 2bko picpicxref
        automatically matched to 1VCT A:108-201
        complexed with ca, cl
        1. region a:108-199 [128703] picpiclink
      3. 2bkp picpicxref
        automatically matched to 1VCT A:108-201
        complexed with k
        1. region a:108-201 [128705] picpiclink
      4. 2bkn picpicxref
        automatically matched to 1VCT A:108-201
        complexed with cs
        1. region a:108-201 [128701] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk