Structural Classification of Proteins
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Superfamily: ApbE-like

duplication: contains two differently decorated beta(2)-alpha(2)-beta(2) subdomains, similar to other T-fold domains; probably does not form the tunnel-shaped oligomers
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: T-fold [55619]
    beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234
    tunnel-shaped: its known members form wide oligomeric barrels different sizes
  4. Superfamily: ApbE-like [143631]
    duplication: contains two differently decorated beta(2)-alpha(2)-beta(2) subdomains, similar to other T-fold domains; probably does not form the tunnel-shaped oligomers
    link to SUPERFAMILY database - Superfamily

Families:

  1. ApbE-like [143632] (1)
    Pfam 02424
    1. Hypothetical protein TM1553 [143633]
      1. Thermotoga maritima [TaxId: 2336] [143634] (1)
        SQ Q9X1N9 44-352
        1. 1vrm picpic
          complexed with mpd, mrd, unl
          1. region a:44-352 [120472] picpiclink
  2. DVU1097-like [160566] (1)
    Pfam 04040; DUF375
    1. Hypothetical protein DVU1097 [160567]
      1. Desulfovibrio vulgaris [TaxId: 881] [160568] (1)
        SQ Q72D34 1-248
        1. 2o34 picpic
          complexed with na
          1. region a:1-248 [148565] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk