Structural Classification of Proteins
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Superfamily: YgaC/TfoX-N like

overall similar to the Type III secretory system chaperone subunits; different shape of the beta-sheet

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Secretion chaperone-like [69634]
    alpha-beta(3)-alpha-beta(2)-alpha; 2 layers: alpha/beta
  4. Superfamily: YgaC/TfoX-N like [159894]
    overall similar to the Type III secretory system chaperone subunits; different shape of the beta-sheet

Families:

  1. YgaC-like [159895] (1)
    Pfam 09400; DUF2002
    1. Putative cytoplasmic protein YgaC [159896]
      1. Salmonella typhimurium [TaxId: 90371] [159897] (1)
        SQ Q8ZML5 1-112
        1. 2g7j picpic
          1. region a:1-112 [147094] picpiclink
  2. TfoX N-terminal domain-like [159898] (1)
    Pfam 04993
    1. Hypothetical protein VP1028 [159899]
      1. Vibrio parahaemolyticus [TaxId: 670] [159900] (2)
        SQ Q87QX1 3-105
        1. 2od0 picpic
          complexed with mg, so4
          1. region a:3-105 [148732] picpiclink
        2. 2od0 picpic
          automatically matched to 2OD0 A:3-105
          complexed with mg, so4
          1. region b:3-104 [148733] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk