Structural Classification of Proteins

Superfamily: Actin depolymerizing proteins

: uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold: Gelsolin-like [55752]
3 layers: a/b/a; contains mixed beta-sheet
Superfamily: Actin depolymerizing proteins [55753]
uperfamily

Families:

Gelsolin-like [55754] (5)
1. Villin, domain 1 (res. 1-126) [55755]
  1. Chicken (Gallus gallus) [TaxId: 9031] [55756] (2)
    1. 2vik
      1. chain a [40829]
    2. 2vil
      1. chain a [40830]
2. Severin, domain 2 [55757]
  1. Dictyostelium discoideum [TaxId: 44689] [55758] (3)
    1. 1svy
      complexed with ca, na
      1. chain a [40831]
    2. 1svq
      1. chain a [40832]
    3. 1svr
      1. chain a [40833]
3. Gelsolin [55759]
  consists of six similar domains
  1. Horse (Equus caballus) [TaxId: 9796] [55760] (2)
    SQ Q28372 1-346
    1. 1d0n
      1. region a:27-152 [40834]
      2. region a:153-262 [40835]
      3. region a:263-383 [40836]
      4. region a:384-532 [40837]
      5. region a:533-628 [40838]
      6. region a:629-755 [40839]
      7. region b:27-152 [40840]
      8. region b:153-262 [40841]
      9. region b:263-383 [40842]
      10. region b:384-532 [40843]
      11. region b:533-628 [40844]
      12. region b:629-755 [40845]
    2. 1rgi
      complexed with atp, ca
      1. region g:26-152 [104928]
      2. region g:153-262 [104929]
      3. region g:263-371 [104930]
  2. Human (Homo sapiens) [TaxId: 9606] [55761] (60)
    SQ P20065 55-179
    1. 3cip
      automatically matched to d1p8zg_
      complexed with atp, ca, gol, mg, so4
      1. region g:2-125 [156678]
    2. 2fh1
      automatically matched to d1h1vg1
      complexed with ca
      1. region a:412-532 [133441]
    3. 2fh1
      automatically matched to d1h1vg2
      complexed with ca
      1. region a:533-628 [133442]
    4. 2fh1
      automatically matched to d1h1vg3
      complexed with ca
      1. region a:629-741 [133443]
    5. 2fh1
      automatically matched to d1h1vg1
      complexed with ca
      1. region b:414-532 [133444]
    6. 2fh1
      automatically matched to d1h1vg2
      complexed with ca
      1. region b:533-628 [133445]
    7. 2fh1
      automatically matched to d1h1vg3
      complexed with ca
      1. region b:629-741 [133446]
    8. 2fh1
      automatically matched to d1h1vg1
      complexed with ca
      1. region c:414-532 [133447]
    9. 2fh1
      automatically matched to d1h1vg2
      complexed with ca
      1. region c:533-628 [133448]
    10. 2fh1
      automatically matched to d1h1vg3
      complexed with ca
      1. region c:629-741 [133449]
    11. 1kcq
      metal ion-binding domain 2
      complexed with cd
      1. chain a [68449]
    12. 3ci5
      automatically matched to d1p8zg_
      complexed with atp, ca, gol, mg, so4
      1. region g:2-125 [156662]
    13. 1t44
      complexed with atp, ca
      1. chain g [106395]
    14. 1d4x
      complexed with atp, ca, mg, so2, so4
      1. chain g [59109]
    15. 1yag
      domain 1
      domain 1
      complexed with atp, ca, mg, so4
      1. chain g [40846]
    16. 1nm1
      domain 1
      complexed with atp, ca, mg, so2, so4
      1. chain g [80653]
    17. 1nlv
      domain 1
      complexed with atp, ca, so2, so4
      1. chain g [80632]
    18. 2ff3
      automatically matched to d1p8zg_
      complexed with atp, ca
      1. region a:28-152 [133364]
    19. 1nmd
      domain 1
      complexed with atp, ca, so2, so4
      1. chain g [80658]
    20. 1p8x
      domains 4, 5 and 6
      complexed with ca
      1. region a:412-532 [94365]
      2. region a:533-628 [94366]
      3. region a:629-741 [94367]
      4. region b:414-532 [94368]
      5. region b:533-628 [94369]
      6. region b:629-741 [94370]
      7. region c:414-532 [94371]
      8. region c:533-628 [94372]
      9. region c:629-741 [94373]
    21. 2ff6
      automatically matched to d1p8zg_
      complexed with atp, ca
      1. region g:28-152 [133376]
    22. 1yvn
      complexed with atp, ca, mg, so4; mutant
      1. chain g [40849]
    23. 1c0f
      domain 1
      complexed with atp, ca; mutant
      1. chain s [40851]
    24. 1mdu
      domain 1
      complexed with atp, ca, hic, trs
      1. chain a [79014]
      2. chain d [79017]
    25. 1esv
      complexed with atp, ca, lar; mutant
      1. chain s [40852]
    26. 1eqy
      complexed with atp, ca; mutant
      1. chain s [40853]
    27. 2fh2
      automatically matched to d1h1vg1
      complexed with ca
      1. region a:412-532 [133450]
    28. 2fh2
      automatically matched to d1h1vg2
      complexed with ca
      1. region a:533-628 [133451]
    29. 2fh2
      automatically matched to d1h1vg3
      complexed with ca
      1. region a:629-741 [133452]
    30. 2fh2
      automatically matched to d1h1vg1
      complexed with ca
      1. region b:414-532 [133453]
    31. 2fh2
      automatically matched to d1h1vg2
      complexed with ca
      1. region b:533-628 [133454]
    32. 2fh2
      automatically matched to d1h1vg3
      complexed with ca
      1. region b:629-741 [133455]
    33. 2fh2
      automatically matched to d1h1vg1
      complexed with ca
      1. region c:414-532 [133456]
    34. 2fh2
      automatically matched to d1h1vg2
      complexed with ca
      1. region c:533-628 [133457]
    35. 2fh2
      automatically matched to d1h1vg3
      complexed with ca
      1. region c:629-741 [133458]
    36. 1p8z
      domain 1 with a domain 2 linker
      complexed with atp, ca, cd
      1. chain g [94376]
    37. 2fh3
      automatically matched to d1h1vg1
      complexed with ca
      1. region a:412-532 [133459]
    38. 2fh3
      automatically matched to d1h1vg2
      complexed with ca
      1. region a:533-628 [133460]
    39. 2fh3
      automatically matched to d1h1vg3
      complexed with ca
      1. region a:629-741 [133461]
    40. 2fh3
      automatically matched to d1h1vg1
      complexed with ca
      1. region b:414-532 [133462]
    41. 2fh3
      automatically matched to d1h1vg2
      complexed with ca
      1. region b:533-628 [133463]
    42. 2fh3
      automatically matched to d1h1vg3
      complexed with ca
      1. region b:629-741 [133464]
    43. 2fh3
      automatically matched to d1h1vg1
      complexed with ca
      1. region c:414-532 [133465]
    44. 2fh3
      automatically matched to d1h1vg2
      complexed with ca
      1. region c:533-628 [133466]
    45. 2fh3
      automatically matched to d1h1vg3
      complexed with ca
      1. region c:629-741 [133467]
    46. 3cjb
      automatically matched to d1p8zg_
      complexed with atp, ca
      1. region g:2-125 [156697]
    47. 1h1v
      domains 4, 5 and 6
      complexed with atp, ca
      1. region g:412-532 [76503]
      2. region g:533-628 [76504]
      3. region g:629-742 [76505]
    48. 3cjc
      automatically matched to d1p8zg_
      complexed with atp, ca, nag, so4
      1. region g:2-125 [156699]
    49. 2fh4
      automatically matched to d1h1vg1
      1. region a:412-532 [133468]
    50. 2fh4
      automatically matched to d1h1vg2
      1. region a:533-628 [133469]
    51. 2fh4
      automatically matched to d1h1vg3
      1. region a:629-741 [133470]
    52. 2fh4
      automatically matched to d1h1vg1
      1. region b:414-532 [133471]
    53. 2fh4
      automatically matched to d1h1vg2
      1. region b:533-628 [133472]
    54. 2fh4
      automatically matched to d1h1vg3
      1. region b:629-741 [133473]
    55. 2fh4
      automatically matched to d1h1vg1
      1. region c:414-532 [133474]
    56. 2fh4
      automatically matched to d1h1vg2
      1. region c:533-628 [133475]
    57. 2fh4
      automatically matched to d1h1vg3
      1. region c:629-741 [133476]
    58. 1nph
      domains 4, 5 and 6 in active, actin free conformation
      complexed with ca
      1. region a:414-532 [85956]
      2. region a:533-628 [85957]
      3. region a:629-742 [85958]
    59. 1c0g
      domain 1
      complexed with atp, ca; mutant
      1. chain s [40848]
    60. 1dej
      domain 1
      complexed with atp, ca; mutant
      1. chain s [40850]
4. Macrophage capping protein Cap G [75511]
  1. Human (Homo sapiens) [TaxId: 9606] [75512] (2)
    1. 1j72
      mutant
      1. region a:11-124 [84127]
      2. region a:125-240 [84128]
      3. region a:241-347 [84129]
    2. 1jhw
      complexed with eu3; mutant
      1. region a:11-124 [71662]
      2. region a:125-234 [71663]
      3. region a:245-346 [71664]
Cofilin-like [55762] (11)
1. Cofilin (actin depolymerizing factor, ADF) [55763]
  1. Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702] [55764] (1)
    1. 1f7s
      complexed with lda
      1. chain a [40857]
  2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [55765] (3)
    1. 1cfy
      1. chain a [40858]
      2. chain b [40859]
    2. 1cof
      1. chain a [40860]
    3. 1qpv
      1. chain a [40861]
  3. Acanthamoeba castellanii, actophorin [TaxId: 5755] [55766] (2)
    1. 1cnu
      1. chain a [40862]
    2. 1ahq
      1. chain a [40863]
  4. Human (Homo sapiens), non-muscle isoform [TaxId: 9606] [111104] (2)
    SQ P23528
    1. 1q8x
      1. chain a [104558]
    2. 1q8g
      1. chain a [104555]
2. Cofilin-like domain of actin-binding protein abp1p [69793]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [69794] (1)
    1. 1hqz
      1. chain 1 [65915]
      2. chain 2 [65916]
      3. chain 3 [65917]
      4. chain 4 [65918]
      5. chain 5 [65919]
      6. chain 6 [65920]
      7. chain 7 [65921]
      8. chain 8 [65922]
      9. chain 9 [65923]
3. Destrin [55767]
  1. Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606] [55768] (2)
    identical sequence in both species
    1. 1ak7
      1. chain a [40864]
    2. 1ak6
      1. chain a [40865]
4. Adf-H domain of twinfilin isoform-1 [82752]
  interacts only with G-actin
  1. Mouse (Mus musculus) [TaxId: 10090] [82753] (1)
    1. 1m4j
      1. chain a [78602]
      2. chain b [78603]
5. Coactosin-like protein Cotl1 (Clp) [111105]
  1. Mouse (Mus musculus) [TaxId: 10090] [111106] (2)
    SQ Q9CQI6
    1. 1udm
      1. chain a [107780]
    2. 1wm4
      1. chain a [114737]
  2. Human (Homo sapiens) [TaxId: 9606] [111107] (5)
    SQ Q14019
    1. 1t3y
      automatically matched to d1wnja_
      1. region a:2-131 [119141]
    2. 1vfq
      automatically matched to d1wnja_
      1. region a:1-131 [120054]
    3. 1t3x
      automatically matched to d1wnja_
      1. region a:2-131 [119140]
    4. 1t2l
      1. chain a [112224]
      2. chain b [112225]
    5. 1wnj
      1. chain a [109436]
6. Glia maturation factor beta, GMF-beta [111108]
  1. Mouse (Mus musculus) [TaxId: 10090] [111109] (1)
    SQ Q9CQI3
    1. 1v6f
      1. chain a [108395]
7. Glia maturation factor gamma, GMF-gamma [111110]
  1. Mouse (Mus musculus) [TaxId: 10090] [111111] (2)
    SQ Q9ERL7
    1. 1vkk
      Structural genomics target
      complexed with po4
      1. chain a [108669]
    2. 1wfs
      Structural genomics target
      1. chain a [114591]