Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: Sensory domain-like

alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Profilin-like [55769]
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. Superfamily: Sensory domain-like [103190]
    alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain
    link to SUPERFAMILY database - Superfamily

Families:

  1. Sensory domain of two-component sensor kinase [103191] (2)
    1. Sensor kinase CitA [103192]
      citrate-binding domain
      1. Klebsiella pneumoniae [TaxId: 573] [103193] (5) picpic
    2. Fumarate sensor DcuS [103194]
      1. Escherichia coli [TaxId: 562] [103195] (2) picpic
  2. YkuI C-terminal domain-like [143732] (2)
    PfamB 021678
    1. Hypothetical protein YkuI, C-terminal domain [143733]
      1. Bacillus subtilis [TaxId: 1423] [143734] (2) picpic
        SQ O35014 263-407
    2. GGDEF family protein VP0354 [160677]
      N-terminal region, consist of two sensory domain-like domains; there is a canonical sensory (PAS) domain in the middle region
      1. Vibrio parahaemolyticus [TaxId: 670] [160678] (4) picpic
        SQ Q87SR8 207-299! SQ Q87SR8 35-206
  3. LuxQ-periplasmic domain-like [160679] (1)
    Pfam 09308; two-domain arrangement similar to the YkuI C-terminal domain-like
    1. Autoinducer 2 sensor kinase/phosphatase LuxQ [160680]
      1. Vibrio harveyi [TaxId: 669] [160681] (4) picpic
        SQ P54302 51-271! SQ P54302 52-270
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk