Structural Classification of Proteins
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Family: Roadblock/LC7 domain

Pfam 03259

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Profilin-like [55769]
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. Superfamily: Roadblock/LC7 domain [103196]
    alpha-beta(2)-alpha-beta(3)-alpha; structurally most similar to the SNARE-like superfamily with a circular permutation of the terminal helices
    link to SUPERFAMILY database - Superfamily
  5. Family: Roadblock/LC7 domain [103197]
    Pfam 03259

Protein Domains:

  1. Giding protein MglB [103198]
    1. Thermus thermophilus [TaxId: 274] [103199] (1)
      1. 1j3w picpic
        structural genomics
        complexed with mes, mg, so4
        1. chain a [90833] picpiclink
        2. chain b [90834] picpiclink
        3. chain c [90835] picpiclink
        4. chain d [90836] picpiclink
  2. MEK binding partner 1, MP1 [111120]
    remote homolog that forms the characteristic complex structures with other members
    1. Human (Homo sapiens) [TaxId: 9606] [111121] (2)
      SQ Q9UHA4
      1. 3cpt picpic
        automatically matched to d1skoa_
        mutant
        1. region a:3-118 [156903] picpiclink
      2. 1sko picpicxref
        1. chain a [105676] picpiclink
    2. Mouse (Mus musculus) [TaxId: 10090] [111122] (2)
      SQ O88653
      1. 1vet picpicxref
        1. chain a [108553] picpiclink
      2. 1veu picpicxref
        1. chain a [108555] picpiclink
  3. Late endosomal/lysosomal Mp1 interacting protein p14 [111123]
    1. Mouse (Mus musculus) [TaxId: 10090] [111124] (5)
      SQ Q9JHS3
      1. 1vet picpicxref
        1. chain b [108554] picpiclink
      2. 2zl1 picpic
        automatically matched to d1veub_
        mutant
        1. region b:2-117 [154619] picpiclink
      3. 1sko picpicxref
        1. chain b [105677] picpiclink
      4. 1veu picpicxref
        1. chain b [108556] picpiclink
      5. 1szv picpic
        automatically matched to d1veub_
        1. region a:1-123 [119098] picpiclink
  4. Dynein light chain 2A, cytoplasmic [118074]
    1. Human (Homo sapiens) [TaxId: 9606] [118075] (8)
      SQ Q9NP97
      1. 2hz5 picpic
        automatically matched to 2B95 A:11-106
        complexed with cs
        1. region a:5-94 [147460] picpiclink
      2. 2hz5 picpic
        automatically matched to 2B95 A:11-106
        complexed with cs
        1. region b:8-95 [147461] picpiclink
      3. 1z09 picpic
        automatically matched to 2B95 A:11-106
        1. region a:1-96 [145950] picpiclink
      4. 1z09 picpic
        automatically matched to 2B95 A:11-106
        1. region b:97-192 [145951] picpiclink
      5. 2b95 picpic
        1. region a:11-106 [146092] picpiclink
      6. 2b95 picpic
        automatically matched to 2B95 A:11-106
        1. region b:11-106 [146093] picpiclink
      7. 2e8j picpic
        automatically matched to 2B95 A:11-106
        1. region a:1-96 [146726] picpiclink
      8. 2e8j picpic
        automatically matched to 2B95 A:11-106
        1. region b:1-96 [146727] picpiclink
    2. Mouse (Mus musculus) [TaxId: 10090] [160682] (2)
      SQ P62627 1-95
      1. 1y4o picpic
        1. region a:10-104 [145901] picpiclink
      2. 1y4o picpic
        automatically matched to 1Y4O A:10-104
        1. region b:210-304 [145902] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk