Family: IPP isomerase-like

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: Nudix [55810]
   beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet
   contains beta-grasp motif
4. Superfamily: Nudix [55811]
   uperfamily
5. Family: IPP isomerase-like [64369]

Protein Domains:

1. Isopentenyl diphosphate isomerase [64370]
   1. Escherichia coli [TaxId: 562] [64371] (25)
      SQ Q46822
      1. 1hzt
         1. chain a [61459]
      2. 1ppv
         complexed with bhi, mg, mn
         1. chain a [104282]
         2. chain b [104283]
      3. 1r67
         complexed with mg; mutant
         1. chain a [97147]
      4. 1pvf
         complexed with dpo, mg, mn
         1. chain a [104323]
         2. chain b [104324]
      5. 1x84
         automatically matched to d1nfsb_
         complexed with mg, mn, sbh
         1. region a:4-179 [121795]
      6. 1x84
         automatically matched to d1nfsb_
         complexed with mg, mn, sbh
         1. region b:4-179 [121796]
      7. 1nfz
         complexed with eip, mg, mn
         1. chain a [85658]
         2. chain b [85659]
      8. 1x83
         complexed with mg, mn, sbh; mutant
         1. region a:4-179 [121793]
      9. 1x83
         automatically matched to 1X83 A:4-179
         complexed with mg, mn, sbh; mutant
         1. region b:4-179 [121794]
      10. 1q54
          complexed with bhi, mg, mn; mutant
          1. chain a [95860]
          2. chain b [95861]
      11. 2g74
          automatically matched to 1X83 A:4-179
          complexed with mg, mn; mutant
          1. region a:4-179 [134728]
      12. 2g74
          automatically matched to 1X83 A:4-179
          complexed with mg, mn; mutant
          1. region b:4-179 [134729]
      13. 1nfs
          complexed with ded, mg, mn
          1. chain a [85640]
          2. chain b [85641]
      14. 2b2k
          automatically matched to 1X83 A:4-179
          complexed with eip, mg, mn; mutant
          1. region a:4-179 [127708]
      15. 2b2k
          automatically matched to 1X83 A:4-179
          complexed with eip, mg, mn; mutant
          1. region b:4-179 [127709]
      16. 1hx3
          complexed with imd, mn, so4; mutant
          1. chain a [61351]
          2. chain b [61352]
      17. 2g73
          automatically matched to 1X83 A:4-179
          complexed with eip, mg, mn; mutant
          1. region a:4-179 [134726]
      18. 2g73
          automatically matched to 1X83 A:4-179
          complexed with eip, mg, mn; mutant
          1. region b:4-179 [134727]
      19. 2vnq
          automatically matched to d1nfsb_
          complexed with imd, mn, so4
          1. region a:4-179 [153341]
      20. 2vnq
          automatically matched to d1nfsb_
          complexed with imd, mn, so4
          1. region b:4-179 [153342]
      21. 1ow2
          complexed with eip, mg, mn; mutant
          1. chain a [93626]
          2. chain b [93627]
      22. 2vnp
          automatically matched to d1nfsb_
          complexed with ded, mg, mn
          1. region a:4-179 [153339]
      23. 2vnp
          automatically matched to d1nfsb_
          complexed with ded, mg, mn
          1. region b:4-179 [153340]
      24. 1ppw
          complexed with eip, mg, mn
          1. chain a [104284]
          2. chain b [104285]
      25. 1i9a
          complexed with mn
          1. chain a [62082]
          2. chain b [62083]
2. Hypothetical protein DR0079 [103217]
   1. Deinococcus radiodurans [TaxId: 1299] [103218] (1)
      1. 1q27
         structural genomics
         1. chain a [95621]
   2. Deinococcus radiodurans str. R1 (Deinococcus radiodurans R1) [TaxId: 243230] [160692] (2)
      1. 2o5f
         automatically matched to d1q27a_
         1. region a:7-168 [148596]
      2. 2o5f
         automatically matched to d1q27a_
         1. region b:7-168 [148597]
3. Hypothetical protein YfcD [143770]
   1. Escherichia coli [TaxId: 562] [143771] (3)
      SQ P65556 8-168
      1. 2fkb
         complexed with act, gol, mg, so4
         1. region a:8-168 [133650]
      2. 2fkb
         automatically matched to 2FKB A:8-168
         complexed with act, gol, mg, so4
         1. region b:8-168 [133651]
      3. 2fkb
         automatically matched to 2FKB A:8-168
         complexed with act, gol, mg, so4
         1. region c:8-168 [133652]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk