Structural Classification of Proteins
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Fold: Thymidylate synthase/dCMP hydroxymethylase

contains large mixed beta-sheet

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Thymidylate synthase/dCMP hydroxymethylase [55830]
    contains large mixed beta-sheet

Superfamilies:

  1. Thymidylate synthase/dCMP hydroxymethylase [55831] (1)
    link to SUPERFAMILY database - Superfamily
    1. Thymidylate synthase/dCMP hydroxymethylase [55832] (10)
      1. Thymidylate synthase [55833]
        1. Escherichia coli [TaxId: 562] [55834] (56)
          1. 2g8o picpic
            automatically matched to d1tlca_
            complexed with cb3, ump
            1. region a:1-264 [134779] picpiclink
          2. 2g8o picpic
            automatically matched to d1tlca_
            complexed with cb3, ump
            1. region b:1-264 [134780] picpiclink
          3. 1qqq picpic
            complexed with so4; mutant
            1. chain a [40931] picpiclink
          4. 2a9w picpic
            automatically matched to d1tlca_
            complexed with 2br, bme, ga9, gol, po4, ump
            1. region a:1-264 [126456] picpiclink
          5. 2a9w picpic
            automatically matched to d1tlca_
            complexed with 2br, bme, ga9, gol, po4, ump
            1. region b:1-264 [126457] picpiclink
          6. 2a9w picpic
            automatically matched to d1tlca_
            complexed with 2br, bme, ga9, gol, po4, ump
            1. region c:1-264 [126458] picpiclink
          7. 2a9w picpic
            automatically matched to d1tlca_
            complexed with 2br, bme, ga9, gol, po4, ump
            1. region d:1-264 [126459] picpiclink
          8. 1f4g picpic
            complexed with gol, mho, sul, tp4
            1. chain a [40933] picpiclink
            2. chain b [40934] picpiclink
          9. 1evf picpic
            complexed with so4; mutant
            1. chain a [40932] picpiclink
          10. 1ev5 picpic
            complexed with so4; mutant
            1. chain a [40935] picpiclink
          11. 1tys picpic
            complexed with cbx, dhf, tmp; mutant
            1. chain a [40937] picpiclink
          12. 1f4b picpic
            complexed with gol, sul
            1. chain a [40936] picpiclink
          13. 1kzi picpic
            complexed with co3, cxm, dtt, gol, thg, ump
            1. chain a [73363] picpiclink
            2. chain b [73364] picpiclink
          14. 2ftq picpic
            automatically matched to d1tlca_
            complexed with po4, so4
            1. region a:1-264 [134076] picpiclink
          15. 1axw picpic
            complexed with cbx, mtx, ump
            1. chain a [40938] picpiclink
            2. chain b [40939] picpiclink
          16. 1trg picpic
            complexed with cb3, cbx, ump
            1. chain a [40940] picpiclink
          17. 1f4e picpic
            complexed with gol, sul, tpr
            1. chain a [40941] picpiclink
          18. 1kce picpic
            complexed with cb3, ump; mutant
            1. chain a [40944] picpiclink
            2. chain b [40945] picpiclink
          19. 1f4f picpic
            complexed with sul, tp3
            1. chain a [40946] picpiclink
            2. chain b [40947] picpiclink
          20. 1f4c picpic
            complexed with gol, sul, tp2
            1. chain a [40950] picpiclink
            2. chain b [40951] picpiclink
          21. 1jg0 picpic
            complexed with ddt, ump
            1. chain a [66659] picpiclink
            2. chain b [66660] picpiclink
          22. 1evg picpic
            complexed with so4; mutant
            1. chain a [40954] picpiclink
          23. 1dna picpic
            complexed with cb3, ump; mutant
            1. chain a [40956] picpiclink
            2. chain b [40957] picpiclink
          24. 1bdu picpic
            complexed with cbx, dur, po4
            1. chain a [40955] picpiclink
          25. 1aob picpic
            complexed with cbx, ddu, po4
            1. chain a [40969] picpiclink
          26. 1bid picpic
            complexed with cbx, ump
            1. chain a [40960] picpiclink
          27. 1tsd picpic
            complexed with bme, cbx, u18, ump
            1. chain a [40948] picpiclink
            2. chain b [40949] picpiclink
          28. 1syn picpic
            complexed with cbx, f89, ump
            1. chain a [40958] picpiclink
            2. chain b [40959] picpiclink
          29. 1bq1 picpic
            complexed with cb3, ump; mutant
            1. chain a [40965] picpiclink
            2. chain b [40966] picpiclink
          30. 1tdu picpic
            complexed with cb3, cbx, dur, po4
            1. chain a [40963] picpiclink
            2. chain b [40964] picpiclink
          31. 1fwm picpic
            complexed with cb3, so4; mutant
            1. chain a [90500] picpiclink
            2. chain b [90501] picpiclink
          32. 1tsn picpic
            complexed with c2f, po4, ufp
            1. chain a [40970] picpiclink
          33. 1tlc picpic
            complexed with cbx, dgp, f89
            1. chain a [40942] picpiclink
            2. chain b [40943] picpiclink
          34. 1aiq picpic
            complexed with cb3, ump; mutant
            1. chain a [40967] picpiclink
            2. chain b [40968] picpiclink
          35. 1bjg picpic
            complexed with tmf, ufp; mutant
            1. chain a [40977] picpiclink
          36. 2tsc picpic
            complexed with cb3, ump
            1. chain a [40952] picpiclink
            2. chain b [40953] picpiclink
          37. 1ddu picpic
            complexed with cb3, cbx, ddu, po4
            1. chain a [40961] picpiclink
            2. chain b [40962] picpiclink
          38. 1bq2 picpic
            complexed with po4; mutant
            1. chain a [40971] picpiclink
          39. 2bbq picpic
            complexed with pfg, ump
            1. chain a [40974] picpiclink
            2. chain b [40975] picpiclink
          40. 1tjs picpic
            complexed with cbx, po4
            1. chain a [40976] picpiclink
          41. 1f4d picpic
            complexed with gol, sul, tp2; mutant
            1. chain a [40972] picpiclink
            2. chain b [40973] picpiclink
          42. 1jtu picpic
            complexed with lyb, ump
            1. chain a [63284] picpiclink
            2. chain b [63285] picpiclink
          43. 1zpr picpic
            complexed with cb3, ump; mutant
            1. chain a [40978] picpiclink
            2. chain b [40979] picpiclink
          44. 1jtq picpic
            complexed with ly3, ump
            1. chain a [63282] picpiclink
            2. chain b [63283] picpiclink
          45. 1nce picpic
            complexed with cb3, cxm, ump; mutant
            1. chain a [80401] picpiclink
            2. chain b [80402] picpiclink
          46. 1an5 picpic
            complexed with cb3, cbx, po4
            1. chain a [40986] picpiclink
            2. chain b [40987] picpiclink
          47. 2kce picpic
            complexed with d16, ump
            1. chain a [40984] picpiclink
            2. chain b [40985] picpiclink
          48. 3tms picpic
            complexed with po4
            1. chain a [40980] picpiclink
          49. 1tls picpic
            complexed with c2f, ufp
            1. chain a [40982] picpiclink
            2. chain b [40983] picpiclink
          50. 1ev8 picpic
            mutant
            1. chain a [40989] picpiclink
          51. 1ajm picpic
            mutant
            1. chain a [40981] picpiclink
          52. 1ffl picpic
            mutant
            1. chain a [40988] picpiclink
          53. 1kzj picpic
            complexed with cb3, cxm, ump; mutant
            1. chain a [73365] picpiclink
            2. chain b [73366] picpiclink
            3. chain c [73367] picpiclink
            4. chain d [73368] picpiclink
            5. chain e [73369] picpiclink
            6. chain f [73370] picpiclink
          54. 1jut picpic
            complexed with lyd, ump
            1. chain a [63301] picpiclink
            2. chain b [63302] picpiclink
          55. 1ju6 picpic
            complexed with lya, po4, ump; mutant
            1. chain a [63289] picpiclink
            2. chain b [63290] picpiclink
            3. chain c [63291] picpiclink
            4. chain d [63292] picpiclink
          56. 1juj picpic
            complexed with lya, ump; mutant
            1. chain a [63297] picpiclink
            2. chain b [63298] picpiclink
            3. chain c [63299] picpiclink
            4. chain d [63300] picpiclink
        2. Lactobacillus casei [TaxId: 1582] [55835] (39)
          1. 1tsy picpic
            complexed with ump; mutant
            1. chain a [40990] picpiclink
          2. 1tsw picpic
            complexed with po4; mutant
            1. chain a [40991] picpiclink
          3. 1bp0 picpic
            complexed with dum, pot; mutant
            1. chain a [40993] picpiclink
          4. 1jmg picpic
            complexed with ump; mutant
            1. chain a [41008] picpiclink
          5. 1tsl picpic
            complexed with a15, po4
            1. chain a [40992] picpiclink
          6. 1bo8 picpic
            complexed with dum, pot; mutant
            1. chain a [40994] picpiclink
          7. 1njd picpic
            complexed with ump; mutant
            1. chain a [41004] picpiclink
          8. 4tms picpic
            complexed with po4
            1. chain a [40995] picpiclink
          9. 1bp6 picpic
            complexed with dum, pot; mutant
            1. chain a [41000] picpiclink
          10. 1bo7 picpic
            complexed with dum; mutant
            1. chain a [40997] picpiclink
          11. 1bpj picpic
            complexed with dum, pot; mutant
            1. chain a [40996] picpiclink
          12. 1njc picpic
            complexed with dcm; mutant
            1. chain a [41005] picpiclink
          13. 1nje picpic
            complexed with dcm
            1. chain a [41001] picpiclink
          14. 1jmi picpic
            complexed with ump; mutant
            1. chain a [41006] picpiclink
          15. 1tsx picpic
            complexed with ump; mutant
            1. chain a [41002] picpiclink
          16. 1nja picpic
            complexed with dcm; mutant
            1. chain a [40999] picpiclink
          17. 1tvv picpic
            complexed with cb3, ump; mutant
            1. chain a [40998] picpiclink
          18. 1jmf picpic
            complexed with ump; mutant
            1. chain a [41007] picpiclink
          19. 2tdm picpic
            complexed with ump
            1. chain a [41011] picpiclink
          20. 1jmh picpic
            complexed with ump; mutant
            1. chain a [41009] picpiclink
          21. 1thy picpic
            complexed with ump
            1. chain a [41010] picpiclink
          22. 1tvu picpic
            complexed with cb3, ump; mutant
            1. chain a [41012] picpiclink
          23. 1vze picpic
            complexed with cb3, ump; mutant
            1. chain a [41003] picpiclink
          24. 1tsv picpic
            complexed with ump; mutant
            1. chain a [41019] picpiclink
          25. 1tvw picpic
            complexed with cb3, ump; mutant
            1. chain a [41013] picpiclink
          26. 1tsz picpic
            complexed with po4; mutant
            1. chain a [41020] picpiclink
          27. 1tsm picpic
            complexed with mr2, po4
            1. chain a [41024] picpiclink
          28. 1vzb picpic
            complexed with ump; mutant
            1. chain a [41022] picpiclink
          29. 1njb picpic
            complexed with ump; mutant
            1. chain a [41023] picpiclink
          30. 1vza picpic
            complexed with ump; mutant
            1. chain a [41017] picpiclink
          31. 2tdd picpic
            complexed with thf, ufp; mutant
            1. chain a [41021] picpiclink
          32. 1lca picpic
            complexed with cb3, ump
            1. chain a [41015] picpiclink
          33. 1vzd picpic
            complexed with cb3, ufp; mutant
            1. chain a [41014] picpiclink
          34. 1vzc picpic
            complexed with ufp; mutant
            1. chain a [41016] picpiclink
          35. 1tda picpic
            complexed with po4; mutant
            1. chain a [41027] picpiclink
          36. 1lce picpic
            complexed with tmf, ump
            1. chain a [41018] picpiclink
          37. 1tdc picpic
            complexed with ump; mutant
            1. chain a [41026] picpiclink
          38. 1tdb picpic
            complexed with ufp; mutant
            1. chain a [41025] picpiclink
          39. 1lcb picpic
            complexed with dhf, tmp
            1. chain a [41028] picpiclink
        3. Bacillus subtilis [TaxId: 1423] [55836] (5)
          1. 1bkp picpic
            1. chain a [41029] picpiclink
            2. chain b [41030] picpiclink
          2. 1bsp picpic
            complexed with po4
            1. chain a [41031] picpiclink
            2. chain b [41032] picpiclink
          3. 1b02 picpic
            complexed with c2f, ufp
            1. chain a [41035] picpiclink
          4. 1bsf picpic
            1. chain a [41033] picpiclink
            2. chain b [41034] picpiclink
          5. 1bko picpic
            1. chain a [41036] picpiclink
            2. chain b [41037] picpiclink
            3. chain c [41038] picpiclink
            4. chain d [41039] picpiclink
        4. Bacteriophage T4 [TaxId: 10665] [55837] (1)
          1. 1tis picpic
            complexed with po4
            1. chain a [41040] picpiclink
        5. Pneumocystis carinii [TaxId: 4754] [55838] (2)
          1. 1f28 picpic
            complexed with f89, ump
            1. chain a [59608] picpiclink
            2. chain b [59609] picpiclink
            3. chain c [59610] picpiclink
            4. chain d [59611] picpiclink
          2. 1ci7 picpic
            complexed with cb3, ump
            1. chain a [41041] picpiclink
            2. chain b [41042] picpiclink
        6. Rat (Rattus norvegicus) [TaxId: 10116] [55839] (2)
          1. 2tsr picpic
            complexed with d16, ump
            1. chain a [41043] picpiclink
            2. chain b [41044] picpiclink
            3. chain c [41045] picpiclink
            4. chain d [41046] picpiclink
          2. 1rts picpic
            complexed with d16, ump
            1. chain a [41047] picpiclink
            2. chain b [41048] picpiclink
        7. Human (Homo sapiens) [TaxId: 9606] [55840] (5)
          1. 1hvy picpic
            complexed with bme, d16, ump
            1. chain a [41049] picpiclink
            2. chain b [41050] picpiclink
            3. chain c [41051] picpiclink
            4. chain d [41052] picpiclink
          2. 1hzw picpic
            complexed with po4
            1. chain a [61464] picpiclink
            2. chain b [61465] picpiclink
          3. 1hw3 picpic
            complexed with edo, so4
            1. chain a [41053] picpiclink
          4. 1hw4 picpic
            complexed with edo, so4
            1. chain a [41054] picpiclink
          5. 1i00 picpic
            complexed with d16, ump
            1. chain a [61475] picpiclink
            2. chain b [61476] picpiclink
      2. Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain [55841]
        1. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [88964] (2)
          1. 1j3k picpicxref
            complexed with ndp, ump, wra; mutant
            1. chain c [84072] picpiclink
            2. chain d [84073] picpiclink
          2. 1j3i picpicxref
            complexed with ndp, ump, wra
            1. chain c [84064] picpiclink
            2. chain d [84065] picpiclink
        2. Cryptosporidium hominis [TaxId: 237895] [100887] (8)
          1. 1j3j picpicxref
            complexed with cp6, ndp, ump; mutant
            1. chain c [84068] picpiclink
            2. chain d [84069] picpiclink
          2. 1sej picpicxref
            Q5CGA3 Q27552
            complexed with f89, ndp, ump
            1. region a:233-521 [105456] picpiclink
            2. region b:233-521 [105458] picpiclink
            3. region c:233-521 [105460] picpiclink
            4. region d:233-521 [105462] picpiclink
            5. region e:233-521 [105464] picpiclink
          3. 1qzf picpicxref
            complexed with cb3, fol, ndp, ump
            1. region a:181-521 [96634] picpiclink
            2. region b:181-521 [96636] picpiclink
            3. region c:181-521 [96638] picpiclink
            4. region d:181-521 [96640] picpiclink
            5. region e:181-521 [96642] picpiclink
          4. 2oip picpicxrefxrefxrefxrefxref
            automatically matched to d1qzfa2
            complexed with cb3, mtx, ndp, ump; mutant
            1. region a:181-521 [148785] picpiclink
          5. 2oip picpicxrefxrefxrefxrefxref
            automatically matched to d1qzfa2
            complexed with cb3, mtx, ndp, ump; mutant
            1. region b:181-521 [148787] picpiclink
          6. 2oip picpicxrefxrefxrefxrefxref
            automatically matched to d1qzfa2
            complexed with cb3, mtx, ndp, ump; mutant
            1. region c:186-521 [148789] picpiclink
          7. 2oip picpicxrefxrefxrefxrefxref
            automatically matched to d1qzfa2
            complexed with cb3, mtx, ndp, ump; mutant
            1. region d:181-521 [148791] picpiclink
          8. 2oip picpicxrefxrefxrefxrefxref
            automatically matched to d1qzfa2
            complexed with cb3, mtx, ndp, ump; mutant
            1. region e:181-521 [148793] picpiclink
      3. dCMP hydroxymethylase [55843]
        1. Bacteriophage T4 [TaxId: 10665] [55844] (3)
          1. 1b5e picpic
            complexed with cmp
            1. chain a [41056] picpiclink
            2. chain b [41057] picpiclink
          2. 1b5d picpic
            complexed with cmp
            1. chain a [41058] picpiclink
            2. chain b [41059] picpiclink
          3. 1b49 picpic
            complexed with po4
            1. chain a [41060] picpiclink
            2. chain c [41061] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk