Structural Classification of Proteins
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Family: Thymidylate synthase/dCMP hydroxymethylase

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Thymidylate synthase/dCMP hydroxymethylase [55830]
    contains large mixed beta-sheet
  4. Superfamily: Thymidylate synthase/dCMP hydroxymethylase [55831]
    link to SUPERFAMILY database - Superfamily
  5. Family: Thymidylate synthase/dCMP hydroxymethylase [55832]

Protein Domains:

  1. Thymidylate synthase [55833]
    1. Escherichia coli [TaxId: 562] [55834] (56)
      1. 2g8o picpic
        automatically matched to d1tlca_
        complexed with cb3, ump
        1. region a:1-264 [134779] picpiclink
      2. 2g8o picpic
        automatically matched to d1tlca_
        complexed with cb3, ump
        1. region b:1-264 [134780] picpiclink
      3. 1qqq picpic
        complexed with so4; mutant
        1. chain a [40931] picpiclink
      4. 2a9w picpic
        automatically matched to d1tlca_
        complexed with 2br, bme, ga9, gol, po4, ump
        1. region a:1-264 [126456] picpiclink
      5. 2a9w picpic
        automatically matched to d1tlca_
        complexed with 2br, bme, ga9, gol, po4, ump
        1. region b:1-264 [126457] picpiclink
      6. 2a9w picpic
        automatically matched to d1tlca_
        complexed with 2br, bme, ga9, gol, po4, ump
        1. region c:1-264 [126458] picpiclink
      7. 2a9w picpic
        automatically matched to d1tlca_
        complexed with 2br, bme, ga9, gol, po4, ump
        1. region d:1-264 [126459] picpiclink
      8. 1f4g picpic
        complexed with gol, mho, sul, tp4
        1. chain a [40933] picpiclink
        2. chain b [40934] picpiclink
      9. 1evf picpic
        complexed with so4; mutant
        1. chain a [40932] picpiclink
      10. 1ev5 picpic
        complexed with so4; mutant
        1. chain a [40935] picpiclink
      11. 1tys picpic
        complexed with cbx, dhf, tmp; mutant
        1. chain a [40937] picpiclink
      12. 1f4b picpic
        complexed with gol, sul
        1. chain a [40936] picpiclink
      13. 1kzi picpic
        complexed with co3, cxm, dtt, gol, thg, ump
        1. chain a [73363] picpiclink
        2. chain b [73364] picpiclink
      14. 2ftq picpic
        automatically matched to d1tlca_
        complexed with po4, so4
        1. region a:1-264 [134076] picpiclink
      15. 1axw picpic
        complexed with cbx, mtx, ump
        1. chain a [40938] picpiclink
        2. chain b [40939] picpiclink
      16. 1trg picpic
        complexed with cb3, cbx, ump
        1. chain a [40940] picpiclink
      17. 1f4e picpic
        complexed with gol, sul, tpr
        1. chain a [40941] picpiclink
      18. 1kce picpic
        complexed with cb3, ump; mutant
        1. chain a [40944] picpiclink
        2. chain b [40945] picpiclink
      19. 1f4f picpic
        complexed with sul, tp3
        1. chain a [40946] picpiclink
        2. chain b [40947] picpiclink
      20. 1f4c picpic
        complexed with gol, sul, tp2
        1. chain a [40950] picpiclink
        2. chain b [40951] picpiclink
      21. 1jg0 picpic
        complexed with ddt, ump
        1. chain a [66659] picpiclink
        2. chain b [66660] picpiclink
      22. 1evg picpic
        complexed with so4; mutant
        1. chain a [40954] picpiclink
      23. 1dna picpic
        complexed with cb3, ump; mutant
        1. chain a [40956] picpiclink
        2. chain b [40957] picpiclink
      24. 1bdu picpic
        complexed with cbx, dur, po4
        1. chain a [40955] picpiclink
      25. 1aob picpic
        complexed with cbx, ddu, po4
        1. chain a [40969] picpiclink
      26. 1bid picpic
        complexed with cbx, ump
        1. chain a [40960] picpiclink
      27. 1tsd picpic
        complexed with bme, cbx, u18, ump
        1. chain a [40948] picpiclink
        2. chain b [40949] picpiclink
      28. 1syn picpic
        complexed with cbx, f89, ump
        1. chain a [40958] picpiclink
        2. chain b [40959] picpiclink
      29. 1bq1 picpic
        complexed with cb3, ump; mutant
        1. chain a [40965] picpiclink
        2. chain b [40966] picpiclink
      30. 1tdu picpic
        complexed with cb3, cbx, dur, po4
        1. chain a [40963] picpiclink
        2. chain b [40964] picpiclink
      31. 1fwm picpic
        complexed with cb3, so4; mutant
        1. chain a [90500] picpiclink
        2. chain b [90501] picpiclink
      32. 1tsn picpic
        complexed with c2f, po4, ufp
        1. chain a [40970] picpiclink
      33. 1tlc picpic
        complexed with cbx, dgp, f89
        1. chain a [40942] picpiclink
        2. chain b [40943] picpiclink
      34. 1aiq picpic
        complexed with cb3, ump; mutant
        1. chain a [40967] picpiclink
        2. chain b [40968] picpiclink
      35. 1bjg picpic
        complexed with tmf, ufp; mutant
        1. chain a [40977] picpiclink
      36. 2tsc picpic
        complexed with cb3, ump
        1. chain a [40952] picpiclink
        2. chain b [40953] picpiclink
      37. 1ddu picpic
        complexed with cb3, cbx, ddu, po4
        1. chain a [40961] picpiclink
        2. chain b [40962] picpiclink
      38. 1bq2 picpic
        complexed with po4; mutant
        1. chain a [40971] picpiclink
      39. 2bbq picpic
        complexed with pfg, ump
        1. chain a [40974] picpiclink
        2. chain b [40975] picpiclink
      40. 1tjs picpic
        complexed with cbx, po4
        1. chain a [40976] picpiclink
      41. 1f4d picpic
        complexed with gol, sul, tp2; mutant
        1. chain a [40972] picpiclink
        2. chain b [40973] picpiclink
      42. 1jtu picpic
        complexed with lyb, ump
        1. chain a [63284] picpiclink
        2. chain b [63285] picpiclink
      43. 1zpr picpic
        complexed with cb3, ump; mutant
        1. chain a [40978] picpiclink
        2. chain b [40979] picpiclink
      44. 1jtq picpic
        complexed with ly3, ump
        1. chain a [63282] picpiclink
        2. chain b [63283] picpiclink
      45. 1nce picpic
        complexed with cb3, cxm, ump; mutant
        1. chain a [80401] picpiclink
        2. chain b [80402] picpiclink
      46. 1an5 picpic
        complexed with cb3, cbx, po4
        1. chain a [40986] picpiclink
        2. chain b [40987] picpiclink
      47. 2kce picpic
        complexed with d16, ump
        1. chain a [40984] picpiclink
        2. chain b [40985] picpiclink
      48. 3tms picpic
        complexed with po4
        1. chain a [40980] picpiclink
      49. 1tls picpic
        complexed with c2f, ufp
        1. chain a [40982] picpiclink
        2. chain b [40983] picpiclink
      50. 1ev8 picpic
        mutant
        1. chain a [40989] picpiclink
      51. 1ajm picpic
        mutant
        1. chain a [40981] picpiclink
      52. 1ffl picpic
        mutant
        1. chain a [40988] picpiclink
      53. 1kzj picpic
        complexed with cb3, cxm, ump; mutant
        1. chain a [73365] picpiclink
        2. chain b [73366] picpiclink
        3. chain c [73367] picpiclink
        4. chain d [73368] picpiclink
        5. chain e [73369] picpiclink
        6. chain f [73370] picpiclink
      54. 1jut picpic
        complexed with lyd, ump
        1. chain a [63301] picpiclink
        2. chain b [63302] picpiclink
      55. 1ju6 picpic
        complexed with lya, po4, ump; mutant
        1. chain a [63289] picpiclink
        2. chain b [63290] picpiclink
        3. chain c [63291] picpiclink
        4. chain d [63292] picpiclink
      56. 1juj picpic
        complexed with lya, ump; mutant
        1. chain a [63297] picpiclink
        2. chain b [63298] picpiclink
        3. chain c [63299] picpiclink
        4. chain d [63300] picpiclink
    2. Lactobacillus casei [TaxId: 1582] [55835] (39)
      1. 1tsy picpic
        complexed with ump; mutant
        1. chain a [40990] picpiclink
      2. 1tsw picpic
        complexed with po4; mutant
        1. chain a [40991] picpiclink
      3. 1bp0 picpic
        complexed with dum, pot; mutant
        1. chain a [40993] picpiclink
      4. 1jmg picpic
        complexed with ump; mutant
        1. chain a [41008] picpiclink
      5. 1tsl picpic
        complexed with a15, po4
        1. chain a [40992] picpiclink
      6. 1bo8 picpic
        complexed with dum, pot; mutant
        1. chain a [40994] picpiclink
      7. 1njd picpic
        complexed with ump; mutant
        1. chain a [41004] picpiclink
      8. 4tms picpic
        complexed with po4
        1. chain a [40995] picpiclink
      9. 1bp6 picpic
        complexed with dum, pot; mutant
        1. chain a [41000] picpiclink
      10. 1bo7 picpic
        complexed with dum; mutant
        1. chain a [40997] picpiclink
      11. 1bpj picpic
        complexed with dum, pot; mutant
        1. chain a [40996] picpiclink
      12. 1njc picpic
        complexed with dcm; mutant
        1. chain a [41005] picpiclink
      13. 1nje picpic
        complexed with dcm
        1. chain a [41001] picpiclink
      14. 1jmi picpic
        complexed with ump; mutant
        1. chain a [41006] picpiclink
      15. 1tsx picpic
        complexed with ump; mutant
        1. chain a [41002] picpiclink
      16. 1nja picpic
        complexed with dcm; mutant
        1. chain a [40999] picpiclink
      17. 1tvv picpic
        complexed with cb3, ump; mutant
        1. chain a [40998] picpiclink
      18. 1jmf picpic
        complexed with ump; mutant
        1. chain a [41007] picpiclink
      19. 2tdm picpic
        complexed with ump
        1. chain a [41011] picpiclink
      20. 1jmh picpic
        complexed with ump; mutant
        1. chain a [41009] picpiclink
      21. 1thy picpic
        complexed with ump
        1. chain a [41010] picpiclink
      22. 1tvu picpic
        complexed with cb3, ump; mutant
        1. chain a [41012] picpiclink
      23. 1vze picpic
        complexed with cb3, ump; mutant
        1. chain a [41003] picpiclink
      24. 1tsv picpic
        complexed with ump; mutant
        1. chain a [41019] picpiclink
      25. 1tvw picpic
        complexed with cb3, ump; mutant
        1. chain a [41013] picpiclink
      26. 1tsz picpic
        complexed with po4; mutant
        1. chain a [41020] picpiclink
      27. 1tsm picpic
        complexed with mr2, po4
        1. chain a [41024] picpiclink
      28. 1vzb picpic
        complexed with ump; mutant
        1. chain a [41022] picpiclink
      29. 1njb picpic
        complexed with ump; mutant
        1. chain a [41023] picpiclink
      30. 1vza picpic
        complexed with ump; mutant
        1. chain a [41017] picpiclink
      31. 2tdd picpic
        complexed with thf, ufp; mutant
        1. chain a [41021] picpiclink
      32. 1lca picpic
        complexed with cb3, ump
        1. chain a [41015] picpiclink
      33. 1vzd picpic
        complexed with cb3, ufp; mutant
        1. chain a [41014] picpiclink
      34. 1vzc picpic
        complexed with ufp; mutant
        1. chain a [41016] picpiclink
      35. 1tda picpic
        complexed with po4; mutant
        1. chain a [41027] picpiclink
      36. 1lce picpic
        complexed with tmf, ump
        1. chain a [41018] picpiclink
      37. 1tdc picpic
        complexed with ump; mutant
        1. chain a [41026] picpiclink
      38. 1tdb picpic
        complexed with ufp; mutant
        1. chain a [41025] picpiclink
      39. 1lcb picpic
        complexed with dhf, tmp
        1. chain a [41028] picpiclink
    3. Bacillus subtilis [TaxId: 1423] [55836] (5)
      1. 1bkp picpic
        1. chain a [41029] picpiclink
        2. chain b [41030] picpiclink
      2. 1bsp picpic
        complexed with po4
        1. chain a [41031] picpiclink
        2. chain b [41032] picpiclink
      3. 1b02 picpic
        complexed with c2f, ufp
        1. chain a [41035] picpiclink
      4. 1bsf picpic
        1. chain a [41033] picpiclink
        2. chain b [41034] picpiclink
      5. 1bko picpic
        1. chain a [41036] picpiclink
        2. chain b [41037] picpiclink
        3. chain c [41038] picpiclink
        4. chain d [41039] picpiclink
    4. Bacteriophage T4 [TaxId: 10665] [55837] (1)
      1. 1tis picpic
        complexed with po4
        1. chain a [41040] picpiclink
    5. Pneumocystis carinii [TaxId: 4754] [55838] (2)
      1. 1f28 picpic
        complexed with f89, ump
        1. chain a [59608] picpiclink
        2. chain b [59609] picpiclink
        3. chain c [59610] picpiclink
        4. chain d [59611] picpiclink
      2. 1ci7 picpic
        complexed with cb3, ump
        1. chain a [41041] picpiclink
        2. chain b [41042] picpiclink
    6. Rat (Rattus norvegicus) [TaxId: 10116] [55839] (2)
      1. 2tsr picpic
        complexed with d16, ump
        1. chain a [41043] picpiclink
        2. chain b [41044] picpiclink
        3. chain c [41045] picpiclink
        4. chain d [41046] picpiclink
      2. 1rts picpic
        complexed with d16, ump
        1. chain a [41047] picpiclink
        2. chain b [41048] picpiclink
    7. Human (Homo sapiens) [TaxId: 9606] [55840] (5)
      1. 1hvy picpic
        complexed with bme, d16, ump
        1. chain a [41049] picpiclink
        2. chain b [41050] picpiclink
        3. chain c [41051] picpiclink
        4. chain d [41052] picpiclink
      2. 1hzw picpic
        complexed with po4
        1. chain a [61464] picpiclink
        2. chain b [61465] picpiclink
      3. 1hw3 picpic
        complexed with edo, so4
        1. chain a [41053] picpiclink
      4. 1hw4 picpic
        complexed with edo, so4
        1. chain a [41054] picpiclink
      5. 1i00 picpic
        complexed with d16, ump
        1. chain a [61475] picpiclink
        2. chain b [61476] picpiclink
  2. Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain [55841]
    1. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [88964] (2)
      1. 1j3k picpicxref
        complexed with ndp, ump, wra; mutant
        1. chain c [84072] picpiclink
        2. chain d [84073] picpiclink
      2. 1j3i picpicxref
        complexed with ndp, ump, wra
        1. chain c [84064] picpiclink
        2. chain d [84065] picpiclink
    2. Cryptosporidium hominis [TaxId: 237895] [100887] (8)
      1. 1j3j picpicxref
        complexed with cp6, ndp, ump; mutant
        1. chain c [84068] picpiclink
        2. chain d [84069] picpiclink
      2. 1sej picpicxref
        Q5CGA3 Q27552
        complexed with f89, ndp, ump
        1. region a:233-521 [105456] picpiclink
        2. region b:233-521 [105458] picpiclink
        3. region c:233-521 [105460] picpiclink
        4. region d:233-521 [105462] picpiclink
        5. region e:233-521 [105464] picpiclink
      3. 1qzf picpicxref
        complexed with cb3, fol, ndp, ump
        1. region a:181-521 [96634] picpiclink
        2. region b:181-521 [96636] picpiclink
        3. region c:181-521 [96638] picpiclink
        4. region d:181-521 [96640] picpiclink
        5. region e:181-521 [96642] picpiclink
      4. 2oip picpicxrefxrefxrefxrefxref
        automatically matched to d1qzfa2
        complexed with cb3, mtx, ndp, ump; mutant
        1. region a:181-521 [148785] picpiclink
      5. 2oip picpicxrefxrefxrefxrefxref
        automatically matched to d1qzfa2
        complexed with cb3, mtx, ndp, ump; mutant
        1. region b:181-521 [148787] picpiclink
      6. 2oip picpicxrefxrefxrefxrefxref
        automatically matched to d1qzfa2
        complexed with cb3, mtx, ndp, ump; mutant
        1. region c:186-521 [148789] picpiclink
      7. 2oip picpicxrefxrefxrefxrefxref
        automatically matched to d1qzfa2
        complexed with cb3, mtx, ndp, ump; mutant
        1. region d:181-521 [148791] picpiclink
      8. 2oip picpicxrefxrefxrefxrefxref
        automatically matched to d1qzfa2
        complexed with cb3, mtx, ndp, ump; mutant
        1. region e:181-521 [148793] picpiclink
  3. dCMP hydroxymethylase [55843]
    1. Bacteriophage T4 [TaxId: 10665] [55844] (3)
      1. 1b5e picpic
        complexed with cmp
        1. chain a [41056] picpiclink
        2. chain b [41057] picpiclink
      2. 1b5d picpic
        complexed with cmp
        1. chain a [41058] picpiclink
        2. chain b [41059] picpiclink
      3. 1b49 picpic
        complexed with po4
        1. chain a [41060] picpiclink
        2. chain c [41061] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk