Structural Classification of Proteins
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Superfamily: N-acetylmuramoyl-L-alanine amidase-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: N-acetylmuramoyl-L-alanine amidase-like [55845]
    contains mixed beta-sheet
  4. Superfamily: N-acetylmuramoyl-L-alanine amidase-like [55846]
    link to SUPERFAMILY database - Superfamily

Families:

  1. N-acetylmuramoyl-L-alanine amidase-like [55847] (10)
    Family 2 zinc amidase;
    1. AmpD protein [82775]
      1. Citrobacter freundii [TaxId: 546] [82776] (1)
        1. 1j3g picpic
          complexed with zn
          1. chain a [77075] picpiclink
    2. Bacteriophage T7 lysozyme (Zn amidase) [55848]
      1. Bacteriophage T7 [TaxId: 10760] [55849] (2)
        1. 1lba picpic
          complexed with zn; mutant
          1. chain a [41062] picpiclink
        2. 1aro picpicxref
          complexed with hg; mutant
          1. chain l [41063] picpiclink
    3. Peptidoglycan recognition protein-lb (Cg14704) [90024]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [90025] (1)
        1. 1oht picpic
          complexed with egl, mse, tla, zn
          1. chain a [87036] picpiclink
    4. Peptidoglycan-recognition protein-SA (Cg11709) [111139]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [111140] (2)
        SQ Q9VYX7 37-203 ! SQ Q9VYX7
        1. 1sxr picpic
          complexed with edo, so4
          1. chain a [106101] picpiclink
          2. chain b [106102] picpiclink
        2. 1s2j picpic
          complexed with po4
          1. chain a [105227] picpiclink
          2. chain b [105228] picpiclink
    5. Peptidoglycan recognition protein I-alpha [111141]
      1. Human (Homo sapiens) [TaxId: 9606] [111142] (5)
        SQ Q96LB9 177-341
        1. 1sk4 picpic
          complexed with na
          1. chain a [105664] picpiclink
        2. 2aph picpic
          automatically matched to d1sk3a_
          complexed with amu, nh2, so4
          1. region a:177-341 [127126] picpiclink
        3. 2aph picpic
          automatically matched to d1sk3a_
          complexed with amu, nh2, so4
          1. region b:177-341 [127127] picpiclink
        4. 1twq picpic
          complexed with amu, nh2, ni
          1. chain a [112766] picpiclink
        5. 1sk3 picpic
          complexed with ni, so4
          1. chain a [105663] picpiclink
    6. N-acetylmuramoyl-L-alanine amidase PlyG [143780]
      1. Bacillus anthracis [TaxId: 1392] [143781] (6)
        SQ Q81WA9 1-157
        Prophage LambdaBa02
        1. 1yb0 picpic
          complexed with po4, zn
          1. region a:1-157 [122865] picpiclink
        2. 1yb0 picpic
          automatically matched to 1YB0 A:1-157
          complexed with po4, zn
          1. region b:1-157 [122866] picpiclink
        3. 1yb0 picpic
          automatically matched to 1YB0 A:1-157
          complexed with po4, zn
          1. region c:1-157 [122867] picpiclink
        4. 2ar3 picpic
          complexed with po4, zn; mutant
          1. region a:1-157 [127188] picpiclink
        5. 2ar3 picpic
          automatically matched to 2AR3 A:1-157
          complexed with po4, zn; mutant
          1. region b:1-157 [127189] picpiclink
        6. 2ar3 picpic
          automatically matched to 2AR3 A:1-157
          complexed with po4, zn; mutant
          1. region c:1-157 [127190] picpiclink
    7. Probable N-acetylmuramoyl-L-alanine amidase YbjR, N-terminal domain [143782]
      1. Escherichia coli [TaxId: 562] [143783] (2)
        SQ P75820 22-194
        1. 2bgx picpicxref
          complexed with zn
          1. region a:7-179 [128505] picpiclink
        2. 2bh7 picpicxref
          automatically matched to 2BGX A:7-179
          complexed with so4, zn
          1. region a:7-179 [128517] picpiclink
    8. Peptidoglycan-recognition protein-LC [143784]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [143785] (3)
        SQ Q9GNK5 335-499! SQ Q9GNK5 355-520
        Cg4432; different splicing isoforms
        1. 2f2l picpic
          complexed with cit, mld, nag, so4
          1. region x:335-499 [132844] picpiclink
        2. 2f2l picpic
          automatically matched to 1Z6I A:355-520
          complexed with cit, mld, nag, so4
          1. region a:355-520 [132843] picpiclink
        3. 1z6i picpic
          complexed with nag, so4
          1. region a:355-520 [124522] picpiclink
    9. Peptidoglycan recognition protein, PGRP-S [143786]
      1. Human (Homo sapiens) [TaxId: 9606] [143787] (1)
        SQ O75594 30-196
        1. 1yck picpic
          1. region a:9-175 [122968] picpiclink
    10. Peptidoglycan-recognition protein-LE [143788]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [143789] (4)
        SQ Q9VXN9 174-344
        1. 2cb3 picpic
          complexed with gol, mld; mutant
          1. region a:174-344 [130175] picpiclink
        2. 2cb3 picpic
          automatically matched to 2CB3 A:174-344
          complexed with gol, mld; mutant
          1. region b:175-344 [130176] picpiclink
        3. 2cb3 picpic
          automatically matched to 2CB3 A:174-344
          complexed with gol, mld; mutant
          1. region c:174-344 [130177] picpiclink
        4. 2cb3 picpic
          automatically matched to 2CB3 A:174-344
          complexed with gol, mld; mutant
          1. region d:174-344 [130178] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk