Structural Classification of Proteins
Fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
8-stranded mixed beta-sheet; 2 layers: alpha/beta
Lineage:
Root:
scop
Class:
Alpha and beta proteins (a+b)
[53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
[55873]
8-stranded mixed beta-sheet; 2 layers: alpha/beta
Superfamilies:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
[55874] (4)
uperfamily
Heat shock protein 90, HSP90, N-terminal domain
[55875] (3)
HSP90 [55876]
Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]
[55877] (21)
2iwx
automatically matched to d1ah8b_
complexed with m1s
region a:2-214
[137758]
2brc
automatically matched to d1ah8b_
complexed with ct5
region a:2-214
[128993]
1zwh
automatically matched to d1ah8b_
complexed with rde
region a:2-214
[125739]
2vw5
automatically matched to d1ah8b_
complexed with bc6, so4
region a:2-214
[153662]
2vw5
automatically matched to d1ah8b_
complexed with bc6, so4
region b:2-214
[153663]
2vw5
automatically matched to d1ah8b_
complexed with bc6, so4
region c:2-214
[153664]
2vw5
automatically matched to d1ah8b_
complexed with bc6, so4
region d:2-214
[153665]
1zw9
automatically matched to d1ah8b_
complexed with h64
region a:2-214
[125738]
2fxs
automatically matched to d1ah8b_
complexed with gol, rda
region a:2-214
[134339]
1amw
complexed with adp
chain a
[41093]
1am1
complexed with adp
chain a
[41095]
2bre
automatically matched to d1ah8b_
complexed with kj2
region a:2-214
[128994]
2bre
automatically matched to d1ah8b_
complexed with kj2
region b:2-214
[128995]
1ah6
chain a
[41094]
1ah8
CASP2
complexed with gol
chain a
[41096]
chain b
[41097]
1us7
chain a
[99857]
2vwc
automatically matched to d1ah8b_
complexed with bc2, gol
region a:2-215
[153674]
1bgq
complexed with rdc
chain a
[41098]
1a4h
complexed with gmy
chain a
[41099]
2iws
automatically matched to d1ah8b_
complexed with np4
region a:2-214
[137756]
2iwu
automatically matched to d1ah8b_
complexed with np5
region a:2-214
[137757]
Human (Homo sapiens)
[TaxId: 9606]
[55878] (53)
SQ
P08238
10-220 # HSP 90-beta isoform ! SQ
P07900
16-223
1uyl
chain a
[108147]
3bm9
automatically matched to d1osfa_
complexed with bxz
region a:17-223
[155415]
3bmy
automatically matched to d1osfa_
complexed with cxz
region a:17-223
[155424]
1byq
complexed with adp, mg
chain a
[41100]
2byi
automatically matched to d1osfa_
complexed with 2dd
region a:16-223
[129482]
1yer
chain a
[41101]
1yc1
automatically matched to d1byqa_
complexed with 4bc; mutant
region a:15-223
[122902]
1osf
complexed with acy, kos, mpd
chain a
[87380]
2h55
automatically matched to d1osfa_
complexed with dz8
region a:17-223
[136140]
3d0b
automatically matched to d1osfa_
complexed with snx
region a:16-223
[157167]
1yc4
automatically matched to d1byqa_
complexed with 43p; mutant
region a:15-223
[122909]
2byh
automatically matched to d1osfa_
complexed with 2d7
region a:16-223
[129481]
2jjc
automatically matched to d1osfa_
complexed with dms, lga
region a:17-223
[148133]
2qfo
automatically matched to d1osfa_
complexed with a13, a51
region a:17-223
[150740]
2qfo
automatically matched to d1osfa_
complexed with a13, a51
region b:17-223
[150741]
1uy6
complexed with pu3
chain a
[108132]
2qg2
automatically matched to d1byqa_
complexed with a91
region a:17-223
[150756]
1uy7
complexed with pu4
chain a
[108133]
1yet
complexed with gdm
chain a
[41102]
2uwd
automatically matched to d1osfa_
complexed with 2gg, mg, so4
region a:16-223
[139989]
1uye
complexed with pu9
chain a
[108138]
1uy9
complexed with pu6
chain a
[108135]
2fwy
automatically matched to d1osfa_
complexed with h64
region a:17-223
[134267]
1uy8
complexed with pu5
chain a
[108134]
2fwz
automatically matched to d1osfa_
complexed with h71
region a:17-223
[134268]
2cdd
automatically matched to d1osfa_
complexed with ct5
region a:16-223
[130262]
2bt0
automatically matched to d1osfa_
complexed with ct5
region a:16-223
[129133]
2bt0
automatically matched to d1osfa_
complexed with ct5
region b:16-223
[129134]
2cdd
automatically matched to d1osfa_
complexed with ct5
region b:16-223
[130263]
2qg0
automatically matched to d1osfa_
complexed with a94
region a:17-223
[150754]
2qg0
automatically matched to d1osfa_
complexed with a94
region b:17-223
[150755]
2ccs
automatically matched to d1byqa_
complexed with 4bh
region a:16-223
[130255]
2bz5
automatically matched to d1osfa_
complexed with ab4
region a:16-223
[129550]
2bz5
automatically matched to d1osfa_
complexed with ab4
region b:16-223
[129551]
1uyc
complexed with pu7
chain a
[108136]
1yc3
automatically matched to d1byqa_
complexed with 4bc
region a:15-223
[122908]
2bsm
automatically matched to d1osfa_
complexed with bsm
region a:16-223
[129097]
1uyg
complexed with pu2
chain a
[108140]
1uyf
complexed with pu1
chain a
[108139]
1uyd
complexed with pu8
chain a
[108137]
1uyi
complexed with puz
chain a
[108142]
1yes
chain a
[41103]
2vci
automatically matched to d1osfa_
complexed with 2gj
region a:16-223
[152918]
1uyk
complexed with pux
chain a
[108146]
2cct
automatically matched to d1byqa_
complexed with 2e1
region a:16-223
[130256]
1uym
complexed with pu3
chain a
[108148]
1uyh
complexed with pu0
chain a
[108141]
2vcj
automatically matched to d1osfa_
complexed with 2eq
region a:16-223
[152919]
2qf6
automatically matched to d1byqa_
complexed with a56
region a:17-223
[150727]
2qf6
automatically matched to d1byqa_
complexed with a56
region b:17-223
[150728]
2qf6
automatically matched to d1byqa_
complexed with a56
region c:17-223
[150729]
2qf6
automatically matched to d1byqa_
complexed with a56
region d:17-223
[150730]
2ccu
automatically matched to d1byqa_
complexed with 2d9
region a:16-223
[130257]
Dog (Canis familiaris)
[TaxId: 9615]
[103225] (29)
SQ
P41148
76-285; Endoplasmin, GRP94
2gqp
automatically matched to d1u2oa_
complexed with 1pe, mo6, pa7, pg4; mutant
region a:74-337
[135513]
2gqp
automatically matched to d1u2oa_
complexed with 1pe, mo6, pa7, pg4; mutant
region b:74-337
[135514]
2h8m
automatically matched to d1u2oa_
complexed with 1pe, nei, pg4; mutant
region a:74-337
[136243]
2h8m
automatically matched to d1u2oa_
complexed with 1pe, nei, pg4; mutant
region b:74-337
[136244]
1qy5
complexed with m2m, nec
chain a
[96573]
1u0z
automatically matched to d1u2oa_
complexed with 1pe, pg4, rdc
region a:74-337
[119413]
1u0z
automatically matched to d1u2oa_
complexed with 1pe, pg4, rdc
region b:74-337
[119414]
1tc6
complexed with adp, mg, pg4
chain a
[106756]
chain b
[106757]
1qy8
complexed with rdi
chain a
[96578]
2fyp
automatically matched to d1u2oa_
complexed with 1pe, pg4, rde; mutant
region a:74-337
[134387]
2fyp
automatically matched to d1u2oa_
complexed with 1pe, pg4, rde; mutant
region b:74-337
[134388]
1yt1
automatically matched to d1u2oa_
complexed with 1pe, pg4; mutant
region a:74-337
[123989]
1yt1
automatically matched to d1u2oa_
complexed with 1pe, pg4; mutant
region b:74-337
[123990]
1qye
complexed with cdy, m2m
chain a
[96587]
1u2o
complexed with 1pe, nec, pg4
chain a
[107615]
chain b
[107616]
1tbw
complexed with amp, mg, pg4
chain a
[106746]
chain b
[106747]
1u0y
automatically matched to d1qy5a_
complexed with pa7, pg4
region a:73-337
[119412]
2gfd
automatically matched to d1u2oa_
complexed with 1pe, pg4, rda; mutant
region a:74-337
[135094]
2gfd
automatically matched to d1u2oa_
complexed with 1pe, pg4, rda; mutant
region b:74-337
[135095]
2hg1
automatically matched to d1u2oa_
complexed with 1pe, mo6, n5o, pg4; mutant
region a:74-337
[136389]
2hg1
automatically matched to d1u2oa_
complexed with 1pe, mo6, n5o, pg4; mutant
region b:74-337
[136390]
1tc0
complexed with atp, mg, pg4
chain a
[106750]
chain b
[106751]
2hch
automatically matched to d1u2oa_
complexed with 1pe, n5a, pg4; mutant
region a:74-337
[136334]
2hch
automatically matched to d1u2oa_
complexed with 1pe, n5a, pg4; mutant
region b:74-337
[136335]
1yt0
automatically matched to d1u2oa_
complexed with adp, mg, pg4; mutant
region a:74-337
[123988]
2exl
automatically matched to d1u2oa_
complexed with 1pe, gmy, pg4; mutant
region a:72-337
[132559]
2exl
automatically matched to d1u2oa_
complexed with 1pe, gmy, pg4; mutant
region b:74-337
[132560]
1ysz
automatically matched to d1u2oa_
complexed with nec, pg4; mutant
region a:74-337
[123987]
1yt2
automatically matched to d1qy5a_
complexed with pg4
region a:73-337
[123991]
DNA gyrase/MutL, N-terminal domain
[55879] (7)
DNA gyrase B [55880]
Escherichia coli
[TaxId: 562]
[55881] (3)
1ei1
complexed with anp, gol, so4; mutant
region a:2-220
[41104]
region b:402-620
[41105]
1kzn
complexed with clorobiocin
complexed with cbn
chain a
[73373]
1aj6
novobiocin-resistant mutant complexed with novobiocin
chain a
[41106]
Thermus thermophilus
[TaxId: 274]
[75534] (1)
1kij
complexed with fmt, nov
region a:9-220
[72515]
region b:9-220
[72517]
DNA topoisomerase II [103226]
Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]
[103227] (2)
1pvg
complexed with anp, mg
region a:7-245
[95162]
region b:8-245
[95164]
1qzr
complexed with anp, cdx, mg
region a:7-245
[96660]
region b:8-245
[96662]
Topoisomerase IV subunit B [103228]
Escherichia coli
[TaxId: 562]
[103229] (2)
1s14
complexed with nov
chain a
[98329]
chain b
[98330]
1s16
complexed with anp, mg, so4
region a:1004-1216
[98332]
region b:2004-2216
[98334]
DNA mismatch repair protein MutL [55882]
Escherichia coli
[TaxId: 562]
[55883] (6)
1b63
complexed with anp, edo, mg
region a:-2-216
[41107]
1nhi
complexed with anp, edo, k, mg
region a:-2-216
[85719]
1b62
complexed with adp, mg
region a:1-216
[41108]
1nhj
complexed with anp, mg, na; mutant
region a:-2-216
[85721]
1nhh
complexed with anp, edo, mg, rb
region a:-2-216
[85717]
1bkn
region a:20-216
[41109]
region b:420-616
[41110]
DNA mismatch repair protein PMS2 [69800]
Human (Homo sapiens)
[TaxId: 9606]
[69801] (3)
1h7s
region a:29-231
[65706]
region b:33-231
[65708]
1ea6
complexed with adp, mg
region a:27-231
[64872]
region b:27-231
[64874]
1h7u
complexed with atg, mg
region a:31-231
[65710]
region b:32-231
[65712]
Topoisomerase VI-B subunit [82778]
contains an H2TH domain inserted after this domain and before the second family-specific domain
Archaeon Sulfolobus shibatae
[TaxId: 2286]
[82779] (10)
2hkj
automatically matched to d1mx0a3
complexed with dms, mg, rdc
region a:10-228
[136555]
1z5b
automatically matched to d1mx0a3
complexed with adp, alf, mg, so4
region a:9-228
[124466]
1z5b
automatically matched to d1mx0a3
complexed with adp, alf, mg, so4
region b:9-228
[124469]
1z59
automatically matched to d1mx0a3
complexed with adp, mg
region a:9-228
[124457]
1mu5
complexed with ca
region a:10-228
[79474]
1z5c
automatically matched to d1mx0a3
complexed with adp, mg, po4
region a:9-228
[124472]
1z5c
automatically matched to d1mx0a3
complexed with adp, mg, po4
region b:9-228
[124475]
1z5a
automatically matched to d1mx0a3
complexed with adp, mg
region a:9-228
[124460]
1z5a
automatically matched to d1mx0a3
complexed with adp, mg
region b:9-228
[124463]
1mx0
complexed with anp, mg, mse, na
region a:4-228
[79620]
region b:4-228
[79623]
region c:4-228
[79626]
region d:4-228
[79629]
region e:4-228
[79632]
region f:4-228
[79635]
Histidine kinase
[55884] (7)
Histidine kinase domain of the osmosensor EnvZ [55885]
Escherichia coli
[TaxId: 562]
[55886] (1)
1bxd
complexed with anp
chain a
[41111]
Histidine kinase CheA [55887]
Thermotoga maritima
[TaxId: 2336]
[55888] (9)
1i58
ATP-binding domain (p4) only
complexed with acp, act, adp, mg; mutant
chain a
[61773]
chain b
[61774]
1i59
ATP-binding domain (p4) only
complexed with act, adp, anp, mg; mutant
chain a
[61775]
chain b
[61776]
1i5c
ATP-binding domain (p4) only
complexed with adp; mutant
chain a
[61781]
chain b
[61782]
1i5a
ATP-binding domain (p4) only
complexed with acp, mn; mutant
chain a
[61777]
chain b
[61778]
1i5b
ATP-binding domain (p4) only
complexed with act, anp, mn; mutant
chain a
[61779]
chain b
[61780]
1b3q
region a:355-539
[41112]
region b:355-539
[41113]
1i5d
ATP-binding domain (p4) only
complexed with 128, so4
chain a
[61783]
2ch4
automatically matched to d1b3qa3
complexed with anp
region a:355-539
[130448]
2ch4
automatically matched to d1b3qa3
complexed with anp
region b:355-539
[130450]
Histidine kinase PhoQ domain [69802]
Escherichia coli
[TaxId: 562]
[69803] (1)
1id0
complexed with anp, mg
chain a
[66111]
Anti-sigma factor spoIIab [75535]
Bacillus stearothermophilus
[TaxId: 1422]
[75536] (5)
SQ
O32727
1th8
complexed with adp, mg
chain a
[106908]
1tid
complexed with atp, mg; mutant
chain a
[106999]
chain c
[107001]
1til
complexed with atp, mg; mutant
chain a
[107004]
chain c
[107006]
chain e
[107008]
1thn
complexed with adp, dmf
chain a
[106916]
chain c
[106918]
1l0o
complexed with adp, mg; mutant
chain a
[73403]
chain b
[73404]
Nitrogen regulation protein NtrB, C-terminal domain [111143]
Escherichia coli
[TaxId: 562]
[111144] (1)
SQ
P06712
194-349
1r62
chain a
[104816]
Sensor histidine kinase TM0853 [143795]
Thermotoga maritima
[TaxId: 2336]
[143796] (1)
SQ
Q9WZV7
321-481
2c2a
complexed with adp, so4
region a:321-481
[129663]
Sensor-type histidine kinase PrrB [143797]
Mycobacterium tuberculosis
[TaxId: 1773]
[143798] (6)
SQ
P0A5Z8
299-446
1ysr
automatically matched to 1YS3 A:299-446
complexed with gol, trs
region a:299-446
[123981]
1ysr
automatically matched to 1YS3 A:299-446
complexed with gol, trs
region b:299-445
[123982]
1ysr
automatically matched to 1YS3 A:299-446
complexed with gol, trs
region c:299-446
[123983]
1ys3
complexed with trs
region a:299-446
[123953]
1ys3
automatically matched to 1YS3 A:299-446
complexed with trs
region b:299-446
[123954]
1ys3
automatically matched to 1YS3 A:299-446
complexed with trs
region c:300-446
[123955]
alpha-ketoacid dehydrogenase kinase, C-terminal domain
[69804] (3)
Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) [69805]
Rat (Rattus norvegicus)
[TaxId: 10116]
[69806] (3)
1gkz
complexed with adp, cl, k, mg, xe
region a:186-378
[65269]
1gkx
complexed with cl
region a:186-378
[65267]
1gjv
complexed with cl, k, mg, sap
region a:186-378
[65221]
Pyruvate dehydrogenase kinase [69807]
Rat (Rattus norvegicus), isozyme 2
[TaxId: 10116]
[69808] (1)
1jm6
complexed with adp, mg
region a:1177-1366
[66877]
region b:1177-1365
[66879]
Human (Homo sapiens)
[TaxId: 9606]
[160702] (8)
SQ
Q15120
177-301
1y8o
automatically matched to 1Y8N A:177-301
complexed with adp, k, lpa, mg
region a:177-301
[144604]
2pnr
automatically matched to 1Y8N A:177-301
complexed with red
region a:177-301
[149697]
2pnr
automatically matched to 1Y8N A:177-301
complexed with red
region b:177-301
[149699]
2pnr
automatically matched to 1Y8N A:177-301
complexed with red
region e:177-301
[149702]
2pnr
automatically matched to 1Y8N A:177-301
complexed with red
region f:177-301
[149704]
2q8i
automatically matched to 1Y8N A:177-301
complexed with gol, k, rdc, red
region a:177-301
[150127]
1y8p
automatically matched to 1Y8N A:177-301
complexed with atp, k, lpa, mg
region a:177-301
[144606]
1y8n
complexed with k, lpa
region a:177-301
[144602]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk