Structural Classification of Proteins
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Fold: Pentein, beta/alpha-propeller

duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Pentein, beta/alpha-propeller [55908]
    duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

Superfamilies:

  1. Pentein [55909] (7)
    link to SUPERFAMILY database - Superfamily
    1. Ribosome anti-association factor eIF6 (aIF6) [55910] (2)
      1. Ribosome anti-association factor eIF6 (aIF6) [55911]
        1. Archaeon Methanococcus jannaschii [TaxId: 2190] [55912] (1) picpic
        2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [55913] (1) picpic
    2. Amidinotransferase [55914] (2)
      common fold is elaborated with many active site-forming insertions
      1. L-arginine: glycine amidinotransferase [55915]
        1. Human (Homo sapiens) [TaxId: 9606] [55916] (11) picpic
      2. L-arginine: inosamine-phosphate amidinotransferase [55917]
        1. Streptomyces griseus [TaxId: 1911] [55918] (1) picpic
    3. Dimethylarginine dimethylaminohydrolase DDAH [64380] (1)
      functionally related to the amidinotransferase, similar active sites
      1. Dimethylarginine dimethylaminohydrolase DDAH [64381]
        1. Pseudomonas aeruginosa [TaxId: 287] [64382] (1) picpic
    4. Arginine deiminase [103232] (2)
      functionally related to the amidinotransferase, similar active sites
      1. Arginine deiminase [103233]
        1. Pseudomonas aeruginosa [TaxId: 287] [103234] (17) picpic
        2. Mycoplasma arginini [TaxId: 2094] [103235] (2) picpic
    5. Peptidylarginine deiminase Pad4, catalytic C-terminal domain [111152] (1)
      # functionally related to the amidinotransferase, similar active sites
      1. Peptidylarginine deiminase Pad4, catalytic C-terminal domain [111153]
        1. Human (Homo sapiens) [TaxId: 9606] [111154] (7) picpic
          SQ Q9UM07
    6. Porphyromonas-type peptidylarginine deiminase [111155] (6)
      Pfam 04371; functionally related to the amidinotransferase, similar active site
      1. Agmatine iminohydrolase [111156]
        1. Thale-cress (Arabidopsis thaliana) [TaxId: 3702] [111157] (3) picpic
          SQ Q8GWW7
        2. Streptococcus mutans [TaxId: 1309] [143807] (12) picpic
          SQ Q8DW17 2-370
        3. Enterococcus faecalis [TaxId: 1351] [160717] (6) picpic
          SQ Q837U5 2-365
      2. Putative peptidyl-arginine deiminase [111158]
        1. Helicobacter pylori J99 [TaxId: 85963] [111159] (1) picpic
          SQ Q9ZN18
        2. Chlorobium tepidum [TaxId: 1097] [118089] (1) picpic
          SQ Q8KCB6
        3. Porphyromonas gingivalis [TaxId: 837] [143808] (2) picpic
          SQ Q7MXM8 3-341
    7. Succinylarginine dihydrolase-like [143809] (1)
      Pfam 04996
      1. Succinylarginine dihydrolase [143810]
        1. Escherichia coli [TaxId: 562] [143811] (14) picpic
          SQ P76216 2-441
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk