Structural Classification of Proteins
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Fold: TBP-like

beta-alpha-beta(4)-alpha

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: TBP-like [55944]
    beta-alpha-beta(4)-alpha

Superfamilies:

  1. TATA-box binding protein-like [55945] (2)
    link to SUPERFAMILY database - Superfamily
    1. TATA-box binding protein (TBP), C-terminal domain [55946] (5) picpic
      duplication: consists of two clear structural repeats
    2. DNA repair glycosylase, N-terminal domain [55952] (2) picpic
      contains a single copy of this fold
  2. MoaD-related protein, C-terminal domain [103239] (1)
    contains a single copy of this fold
    link to SUPERFAMILY database - Superfamily
    1. MoaD-related protein, C-terminal domain [103240] (1) picpic
  3. KA1-like [103243] (2)
    contains a single copy of this fold
    link to SUPERFAMILY database - Superfamily
    1. Kinase associated domain 1, KA1 [103244] (1) picpic
      Pfam 02149
    2. Ssp2 C-terminal domain-like [160723] (3) picpic
      PfamB 166430
  4. TT1751-like [103247] (1)
    contains a single copy of this fold decorated with additional structures; forms dimer
    link to SUPERFAMILY database - Superfamily
    1. TT1751-like [103248] (2) picpic
      Pfam 03625; DUF302
  5. Cell-division protein ZipA, C-terminal domain [64383] (1)
    contains a single copy of this fold
    link to SUPERFAMILY database - Superfamily
    1. Cell-division protein ZipA, C-terminal domain [64384] (1) picpic
  6. Phosphoglucomutase, C-terminal domain [55957] (1)
    contains a single copy of this fold and an extra beta-strand at the C-terminus
    link to SUPERFAMILY database - Superfamily
    1. Phosphoglucomutase, C-terminal domain [55958] (4) picpic
      Pfam 00408
  7. Bet v1-like [55961] (10)
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
    link to SUPERFAMILY database - Superfamily
    1. Pathogenesis-related protein 10 (PR10)-like [55962] (8) picpic
    2. STAR domain [55966] (4) picpic
    3. Phoshatidylinositol transfer protein, PITP [64388] (4) picpic
    4. Ring hydroxylating alpha subunit catalytic domain [55969] (7) picpic
      Pfam 00848; contains a few insertion and C-terminal extension compared with Bet v1
    5. AHSA1 domain [111168] (11) picpic
      Pfam 05146
    6. oligoketide cyclase/dehydrase-like [118101] (3) picpic
      Pfam 03654
    7. PA1206-like [143839] (1) picpic
    8. Atu1531-like [160742] (2) picpic
      Pfam 10604; Polyketide cyclase/dehydrase and lipid transport
    9. Smu440-like [160747] (1) picpic
      PfamB 094079
    10. CoxG-like [160750] (2) picpic
      Pfam 06240
  8. Rbstp2229 protein [111171] (1)
    forms segment-swapped dimers further organized in hexamers
    link to SUPERFAMILY database - Superfamily
    1. Rbstp2229 protein [111172] (1) picpic
  9. RalF, C-terminal domain [118104] (1)
    contains a single copy of this fold decorated with additional structures
    link to SUPERFAMILY database - Superfamily
    1. RalF, C-terminal domain [118105] (1) picpic
  10. YwmB-like [143842] (1)
    duplication: tandem repeat of two circularly permuted motifs, alpha-beta-alpha-beta(4), assembled as in the TATA-box binding domain; forms a swapped dimer by exchanging the equivalent parts of the C-terminal motifs
    link to SUPERFAMILY database - Superfamily
    1. YwmB-like [143843] (1) picpic
  11. YugN-like [160755] (1)
    1. YugN-like [160756] (1) picpic
      Pfam 08868
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk