Structural Classification of Proteins
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Family: DNA repair glycosylase, N-terminal domain

contains a single copy of this fold

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: TBP-like [55944]
    beta-alpha-beta(4)-alpha
  4. Superfamily: TATA-box binding protein-like [55945]
    link to SUPERFAMILY database - Superfamily
  5. Family: DNA repair glycosylase, N-terminal domain [55952]
    contains a single copy of this fold

Protein Domains:

  1. 3-Methyladenine DNA glycosylase II (gene alkA or aidA) [55953]
    1. Escherichia coli [TaxId: 562] [55954] (35)
      SQ P04395
      1. 1mpg picpicxref
        complexed with gol
        1. region a:1-99 [41296] picpiclink
        2. region b:1-99 [41297] picpiclink
      2. 3cw7 picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region a:1-99 [157028] picpiclink
      3. 3cw7 picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region b:1-99 [157030] picpiclink
      4. 3cw7 picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region c:1-99 [157032] picpiclink
      5. 3cw7 picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region d:1-99 [157034] picpiclink
      6. 3cws picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fi
        1. region a:1-99 [157053] picpiclink
      7. 3cws picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fi
        1. region b:1-99 [157055] picpiclink
      8. 3cws picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fi
        1. region c:1-99 [157057] picpiclink
      9. 3cws picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fi
        1. region d:1-99 [157059] picpiclink
      10. 3cwa picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region a:1-99 [157038] picpiclink
      11. 3cwa picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region b:1-99 [157040] picpiclink
      12. 3cwa picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region c:1-99 [157042] picpiclink
      13. 3cwa picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region d:1-99 [157044] picpiclink
      14. 1pvs picpicxref
        complexed with 7hp
        1. region a:1-99 [104330] picpiclink
        2. region b:1-99 [104332] picpiclink
      15. 3cvs picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region a:1-99 [157012] picpiclink
      16. 3cvs picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region b:1-99 [157014] picpiclink
      17. 3cvs picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region c:1-99 [157016] picpiclink
      18. 3cvs picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region d:1-99 [157018] picpiclink
      19. 3cwt picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fi
        1. region a:1-99 [157061] picpiclink
      20. 3cwt picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fi
        1. region b:1-99 [157063] picpiclink
      21. 3cwt picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fi
        1. region c:1-99 [157065] picpiclink
      22. 3cwt picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fi
        1. region d:1-99 [157067] picpiclink
      23. 3cvt picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region a:1-99 [157020] picpiclink
      24. 3cvt picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region b:1-99 [157022] picpiclink
      25. 3cvt picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region c:1-99 [157024] picpiclink
      26. 3cvt picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 8og
        1. region d:1-99 [157026] picpiclink
      27. 1diz picpicxref
        protein/DNA complex; complexed with na, nri
        1. region a:1-99 [41298] picpiclink
        2. region b:1-99 [41299] picpiclink
      28. 3cwu picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fe
        1. region a:1-99 [157069] picpiclink
      29. 3cwu picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fe
        1. region b:1-99 [157071] picpiclink
      30. 3cwu picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fe
        1. region c:1-99 [157073] picpiclink
      31. 3cwu picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with 2fe
        1. region d:1-99 [157075] picpiclink
      32. 3d4v picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with fmg
        1. region a:1-99 [157303] picpiclink
      33. 3d4v picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with fmg
        1. region b:1-99 [157305] picpiclink
      34. 3d4v picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with fmg
        1. region c:1-99 [157307] picpiclink
      35. 3d4v picpicxrefxrefxrefxref
        automatically matched to d1diza2
        complexed with fmg
        1. region d:1-99 [157309] picpiclink
  2. 8-oxoguanine glycosylase [55955]
    1. Human (Homo sapiens) [TaxId: 9606] [55956] (23)
      1. 2noh picpicxref
        automatically matched to d1ebma2
        complexed with 8og, ca; mutant
        1. region a:12-135 [138410] picpiclink
      2. 1m3q picpicxref
        complexed with ang, ca, drz; mutant
        1. region a:9-135 [91185] picpiclink
      3. 1ko9 picpicxref
        complexed with so4
        1. region a:12-135 [68718] picpiclink
      4. 1lwy picpicxref
        borohydride trapped intermediate
        complexed with ped
        1. region a:9-135 [78286] picpiclink
      5. 2nob picpicxref
        automatically matched to d1ebma2
        complexed with 8og, ca; mutant
        1. region a:12-135 [138404] picpiclink
      6. 1m3h picpicxref
        complexed with ca, ddx; mutant
        1. region a:9-135 [91177] picpiclink
      7. 1ebm picpicxref
        complexed with ca, oxo; mutant
        1. region a:9-135 [41300] picpiclink
      8. 1lww picpicxref
        borohydride trapped intermediate
        complexed with brg, ca, ped
        1. region a:9-135 [78284] picpiclink
      9. 2noe picpicxref
        automatically matched to d1ebma2
        complexed with 8og, ca; mutant
        1. region a:12-135 [138406] picpiclink
      10. 1n39 picpicxref
        complexed with 3dr, ca; mutant
        1. region a:9-135 [85290] picpiclink
      11. 1hu0 picpicxref
        borohydride trapped intermediate complex
        complexed with ca, oxg, ped
        1. region a:9-135 [76724] picpiclink
      12. 1n3a picpicxref
        complexed with 3dr, ca; mutant
        1. region a:9-135 [85292] picpiclink
      13. 1lwv picpicxref
        borohydride trapped intermediate
        complexed with ang, ca, ped
        1. region a:9-135 [78282] picpiclink
      14. 2nof picpicxref
        automatically matched to d1ebma2
        complexed with 8og, ca; mutant
        1. region a:12-135 [138408] picpiclink
      15. 1yqr picpicxref
        automatically matched to d1ebma2
        complexed with 8og, ca; mutant
        1. region a:12-135 [123898] picpiclink
      16. 2nol picpicxref
        automatically matched to d1ebma2
        complexed with 8og, ca; mutant
        1. region a:12-135 [138412] picpiclink
      17. 1yqm picpicxref
        automatically matched to d1ebma2
        complexed with 7gu, ca; mutant
        1. region a:12-135 [123894] picpiclink
      18. 1yql picpicxref
        automatically matched to d1ebma2
        complexed with ca, ppw; mutant
        1. region a:12-135 [123892] picpiclink
      19. 2noz picpicxref
        automatically matched to d1ebma2
        complexed with 8og, ca; mutant
        1. region a:12-135 [138415] picpiclink
      20. 1yqk picpicxref
        automatically matched to d1ebma2
        complexed with ca, gol; mutant
        1. region a:12-135 [123890] picpiclink
      21. 1fn7 picpicxref
        complexed with 3dr, ca
        1. region a:9-135 [59893] picpiclink
      22. 2i5w picpicxref
        automatically matched to d1ebma2
        complexed with 8og, ca, gol; mutant
        1. region a:12-135 [137070] picpiclink
      23. 1n3c picpicxref
        complexed with 8og, ca; mutant
        1. region a:9-135 [85294] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk