Structural Classification of Proteins
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Superfamily: Bet v1-like

contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: TBP-like [55944]
    beta-alpha-beta(4)-alpha
  4. Superfamily: Bet v1-like [55961]
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
    link to SUPERFAMILY database - Superfamily

Families:

  1. Pathogenesis-related protein 10 (PR10)-like [55962] (8)
    1. Major tree pollen allergen [55963]
      1. White birch (Betula verrucosa), Bet v 1 [TaxId: 3505] [55964] (5)
        1. 1qmr picpic
          mutant
          1. chain a [41314] picpiclink
        2. 1bv1 picpic
          1. chain a [41313] picpiclink
        3. 1llt picpic
          mutant
          1. chain a [91063] picpiclink
        4. 1btv picpic
          1. chain a [41315] picpiclink
        5. 1b6f picpic
          1. chain a [41316] picpiclink
      2. European white birch (Betula pendula), Bet v I-a [TaxId: 3505] [55965] (1)
        1. 1fsk picpicxrefxrefxrefxref
          1. chain a [41317] picpiclink
          2. chain d [41318] picpiclink
          3. chain g [41319] picpiclink
          4. chain j [41320] picpiclink
      3. European white birch (Betula pendula), Bet v 1-l [TaxId: 3505] [82782] (1)
        1. 1fm4 picpic
          complexed with dho
          1. chain a [76186] picpiclink
      4. Sweet cherry (Prunus avium), pru av 1 [TaxId: 42229] [64387] (2)
        1. 1e09 picpic
          1. chain a [59146] picpiclink
        2. 1h2o picpic
          mutant
          1. chain a [90547] picpiclink
    2. Plant pathogenesis-related protein PR10 [75543]
      1. Yellow lupine (Lupinus luteus) [TaxId: 3873] [75544] (4)
        1. 1icx picpic
          isoform llpr10.1a
          1. chain a [71191] picpiclink
        2. 1xdf picpic
          isoform llpr10.2a
          complexed with epe, na
          1. region a:1-157 [121868] picpiclink
        3. 1xdf picpic
          automatically matched to 1XDF A:1-157
          complexed with epe, na
          1. region b:1-157 [121869] picpiclink
        4. 1ifv picpic
          isoform llpr10.1b
          1. chain a [71204] picpiclink
          2. chain b [71205] picpiclink
      2. Jicama (Pachyrhizus erosus), SPE-16 [TaxId: 109171] [143818] (4)
        SQ Q6T6J0 2-148
        1. 1txc picpic
          automatically matched to 1TW0 A:1-147
          complexed with 2an
          1. region a:1-147 [119384] picpiclink
        2. 1txc picpic
          automatically matched to 1TW0 A:1-147
          complexed with 2an
          1. region b:1-147 [119385] picpiclink
        3. 1tw0 picpic
          1. region a:1-147 [119364] picpiclink
        4. 1tw0 picpic
          automatically matched to 1TW0 A:1-147
          1. region b:1-147 [119365] picpiclink
    3. Hypothetical protein At1G24000 [103251]
      1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [103252] (3)
        1. 1vjh picpic
          structural genomics
          1. chain a [100811] picpiclink
          2. chain b [100812] picpiclink
        2. 2q3q picpic
          automatically matched to d1vjha_
          1. region a:1-120 [139799] picpiclink
        3. 2q3q picpic
          automatically matched to d1vjha_
          1. region b:1-120 [139800] picpiclink
    4. Major allergen api g 1 [143819]
      1. Celery (Apium graveolens) [TaxId: 4045] [143820] (2)
        SQ P49372 2-154
        1. 2bk0 picpic
          1. region a:2-154 [128646] picpiclink
        2. 2bk0 picpic
          automatically matched to 2BK0 A:2-154
          1. region b:2-154 [128647] picpiclink
  2. STAR domain [55966] (4)
    1. Lipid transport domain of Mln64 [55967]
      1. Human (Homo sapiens) [TaxId: 9606] [55968] (1)
        1. 1em2 picpic
          complexed with tar; mutant
          1. chain a [41321] picpiclink
    2. Cholesterol-regulated Start protein 4 (Stard4). [75545]
      1. Mouse (Mus musculus) [TaxId: 10090] [75546] (1)
        1. 1jss picpic
          mutant
          1. chain a [71844] picpiclink
          2. chain b [71845] picpiclink
    3. Phosphatidylcholine transfer protein [75547]
      1. Human (Homo sapiens) [TaxId: 9606] [75548] (3)
        1. 1ln1 picpic
          complexed with dlp
          1. chain a [74038] picpiclink
        2. 1ln3 picpic
          complexed with cpl, mse
          1. chain a [74041] picpiclink
          2. chain b [74042] picpiclink
        3. 1ln2 picpic
          complexed with dlp, mse
          1. chain a [74039] picpiclink
          2. chain b [74040] picpiclink
    4. Star-related lipid transfer protein 13 [160730]
      1. Human (Homo sapiens) [TaxId: 9606] [160731] (3)
        SQ Q9Y3M8 908-1104
        1. 2pso picpic
          1. region a:908-1104 [149824] picpiclink
        2. 2pso picpic
          automatically matched to 2PSO A:908-1104
          1. region b:908-1104 [149825] picpiclink
        3. 2pso picpic
          automatically matched to 2PSO A:908-1104
          1. region c:909-1102 [149826] picpiclink
  3. Phoshatidylinositol transfer protein, PITP [64388] (4)
    1. Phoshatidylinositol transfer protein, PITP [64389]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [64390] (1)
        1. 1t27 picpic
          complexed to phosphatidylcholine
          complexed with pcw
          1. chain a [99075] picpiclink
      2. Mouse (Mus musculus) [TaxId: 10090] [75549] (1)
        1. 1kcm picpic
          1. chain a [72300] picpiclink
      3. Human (Homo sapiens) [TaxId: 9606] [103253] (1)
        1. 1uw5 picpic
          complexed to phosphatidylinositol
          complexed with pie
          1. chain a [100075] picpiclink
          2. chain b [100076] picpiclink
          3. chain c [100077] picpiclink
          4. chain d [100078] picpiclink
      4. Rat (Rattus norvegicus), beta isoform [TaxId: 10116] [143821] (1)
        SQ P53812 1-270
        1. 2a1l picpic
          complexed with pcw
          1. region a:2-271 [126002] picpiclink
  4. Ring hydroxylating alpha subunit catalytic domain [55969] (7)
    Pfam 00848; contains a few insertion and C-terminal extension compared with Bet v1
    1. Naphthalene 1,2-dioxygenase alpha subunit, C-domain [55970]
      1. Pseudomonas putida [TaxId: 303] [55971] (16)
        1. 1o7n picpicxrefxref
          complexed with edo, fe, fes, ind, oxy, so4
          1. region a:155-448 [81163] picpiclink
        2. 2hmj picpicxrefxref
          automatically matched to d1o7ga2
          complexed with edo, fe, fes, so4; mutant
          1. region a:155-446 [136586] picpiclink
        3. 2hmo picpicxrefxref
          automatically matched to d1o7ga2
          complexed with 3nt, edo, fe, fes, so4
          1. region a:155-446 [136601] picpiclink
        4. 2hmm picpicxrefxref
          automatically matched to d1o7ga2
          complexed with an3, edo, fe, fes, so4; mutant
          1. region a:155-446 [136595] picpiclink
        5. 2hmk picpicxrefxref
          automatically matched to d1o7ga2
          complexed with edo, fe, fes, pey, so4; mutant
          1. region a:155-446 [136589] picpiclink
        6. 2hmn picpicxrefxref
          automatically matched to d1o7ga2
          complexed with an3, edo, fe, fes, so4; mutant
          1. region a:155-446 [136598] picpiclink
        7. 1eg9 picpicxrefxref
          complexed with fes, ind, of1, so4
          1. region a:155-447 [41322] picpiclink
        8. 1o7g picpicxrefxref
          complexed with edo, fe, fes, npy, so4
          1. region a:155-448 [81135] picpiclink
        9. 1uuv picpicxrefxref
          automatically matched to d1o7ga2
          complexed with edo, fe, fes, ind, no, so4
          1. region a:155-447 [119700] picpiclink
        10. 1o7m picpicxrefxref
          complexed with edo, fe, fes, oxy, so4
          1. region a:155-448 [81160] picpiclink
        11. 2hml picpicxrefxref
          automatically matched to d1o7ga2
          complexed with edo, fe, fes, pey, so4; mutant
          1. region a:155-446 [136592] picpiclink
        12. 1o7w picpicxrefxref
          complexed with edo, fe, fes, so4
          1. region a:155-447 [81169] picpiclink
        13. 1o7p picpicxrefxref
          complexed with edo, fe, fes, ndh, so4
          1. region a:155-447 [81166] picpiclink
        14. 1o7h picpicxrefxref
          complexed with edo, fe, fes, so4
          1. region a:155-448 [81138] picpiclink
        15. 1uuw picpicxrefxref
          automatically matched to d1o7ga2
          complexed with fe, fes, no, so4
          1. region a:155-447 [119703] picpiclink
        16. 1ndo picpicxrefxref
          complexed with fe, fes
          1. region a:155-447 [41323] picpiclink
          2. region c:155-447 [41324] picpiclink
          3. region e:155-445 [41325] picpiclink
      2. Rhodococcus sp. ncimb12038 [TaxId: 92694] [143822] (6)
        SQ Q9X3R9 163-441
        1. 2b1x picpicxrefxrefxrefxrefxrefxref
          complexed with fe, fes, mpd
          1. region a:163-441 [127676] picpiclink
        2. 2b1x picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2B1X A:163-441
          complexed with fe, fes, mpd
          1. region c:163-441 [127679] picpiclink
        3. 2b1x picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2B1X A:163-441
          complexed with fe, fes, mpd
          1. region e:163-441 [127682] picpiclink
        4. 2b24 picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2B1X A:163-441
          complexed with fe, fes, ind
          1. region a:163-440 [127691] picpiclink
        5. 2b24 picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2B1X A:163-441
          complexed with fe, fes, ind
          1. region c:163-440 [127694] picpiclink
        6. 2b24 picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2B1X A:163-441
          complexed with fe, fes, ind
          1. region e:163-440 [127697] picpiclink
    2. Biphenyl dioxygenase large subunit BphA1, C-terminal domain [111166]
      1. Rhodococcus sp. (strain RHA1) [TaxId: 101510] [111167] (2)
        SQ Q53122 17-451
        1. 1uli picpicxrefxref
          complexed with fe2, fes
          1. region a:171-451 [107922] picpiclink
          2. region c:171-451 [107925] picpiclink
          3. region e:171-451 [107928] picpiclink
        2. 1ulj picpicxrefxref
          complexed with bnl, fe2, fes
          1. region a:171-451 [107931] picpiclink
          2. region c:171-451 [107934] picpiclink
          3. region e:171-451 [107937] picpiclink
    3. 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO [143823]
      1. Pseudomonas putida [TaxId: 303] [143824] (1)
        SQ O05935 164-442
        1. 1z01 picpicxref
          complexed with fe, fes
          1. region a:164-442 [124297] picpiclink
    4. Large subunit of cumene dioxygenase cumA1 [143825]
      1. Pseudomonas fluorescens [TaxId: 294] [143826] (1)
        SQ Q51743 181-459
        1. 1wql picpicxrefxref
          complexed with fe2, fes, oxy
          1. region a:181-459 [121171] picpiclink
    5. Terminal oxygenase component of carbazole CarAa [143827]
      1. Janthinobacterium sp. j3 [TaxId: 213804] [143828] (10)
        SQ Q84II6 143-384
        1. 2de6 picpicxrefxrefxref
          automatically matched to 1WW9 A:143-384
          complexed with fe2, fes
          1. region a:143-384 [131416] picpiclink
        2. 2de6 picpicxrefxrefxref
          automatically matched to 1WW9 A:143-384
          complexed with fe2, fes
          1. region b:143-384 [131418] picpiclink
        3. 2de6 picpicxrefxrefxref
          automatically matched to 1WW9 A:143-384
          complexed with fe2, fes
          1. region c:143-384 [131420] picpiclink
        4. 2de5 picpicxrefxrefxref
          automatically matched to 1WW9 A:143-384
          complexed with fe2, fes
          1. region a:143-384 [131410] picpiclink
        5. 2de5 picpicxrefxrefxref
          automatically matched to 1WW9 A:143-384
          complexed with fe2, fes
          1. region b:143-384 [131412] picpiclink
        6. 2de5 picpicxrefxrefxref
          automatically matched to 1WW9 A:143-384
          complexed with fe2, fes
          1. region c:143-384 [131414] picpiclink
        7. 1ww9 picpicxref
          complexed with fe2, fes
          1. region a:143-384 [121353] picpiclink
        8. 2de7 picpicxrefxrefxref
          automatically matched to 1WW9 A:143-384
          complexed with 9ca, fe2, fes
          1. region a:143-384 [131422] picpiclink
        9. 2de7 picpicxrefxrefxref
          automatically matched to 1WW9 A:143-384
          complexed with 9ca, fe2, fes
          1. region b:143-384 [131424] picpiclink
        10. 2de7 picpicxrefxrefxref
          automatically matched to 1WW9 A:143-384
          complexed with 9ca, fe2, fes
          1. region c:143-384 [131426] picpiclink
    6. Nitrobenzene dioxygenase alpha subunit, NBDO-alpha [143829]
      1. Comamonas sp. JS765 [TaxId: 58226] [143830] (3)
        SQ Q8RTL4 153-439
        1. 2bmo picpicxrefxref
          complexed with edo, eoh, fe, fes, ni
          1. region a:153-439 [128805] picpiclink
        2. 2bmr picpicxrefxref
          automatically matched to 2BMO A:153-439
          complexed with 3nt, edo, eoh, fe, fes, ni
          1. region a:153-439 [128811] picpiclink
        3. 2bmq picpicxrefxref
          automatically matched to 2BMO A:153-439
          complexed with edo, eoh, fe, fes, nbz, ni
          1. region a:153-439 [128808] picpiclink
  5. AHSA1 domain [111168] (11)
    Pfam 05146
    1. Hypothetical protein NE0264 [111169]
      1. Nitrosomonas europaea [TaxId: 915] [111170] (1)
        SQ Q82XK1
        1. 1xfs picpic
          Structural genomics target
          1. chain a [109589] picpiclink
          2. chain b [109590] picpiclink
    2. Hypothetical protein MM0500 [118095]
      1. Methanosarcina mazei [TaxId: 2209] [118096] (1)
        SQ Q8PZJ2
        1. 1xuv picpic
          Structural genomics target
          1. chain a [116069] picpiclink
          2. chain b [116070] picpiclink
          3. chain c [116071] picpiclink
    3. Hypothetical protein BH1534 [118097]
      1. Bacillus halodurans [TaxId: 86665] [118098] (1)
        SQ Q9KCN5
        1. 1xn5 picpic
          Structural genomics target
          1. chain a [115574] picpiclink
    4. Hypothetical protein BC4709 [118099]
      1. Bacillus cereus [TaxId: 1396] [118100] (1)
        SQ Q816V6
        1. 1xn6 picpic
          Structural genomics target
          1. chain a [115575] picpiclink
    5. Calicheamicin gene cluster protein CalC [143831]
      possible link between the AHSA1 (Pfam 08327) and oligoketide cyclase/dehydrase-like (new Pfam 03364) families
      1. Micromonospora echinospora [TaxId: 1877] [143832] (3)
        SQ Q8KNF0 27-181
        1. 1zxf picpic
          1. region a:1-155 [125771] picpiclink
        2. 2gkd picpic
          automatically matched to 1ZXF A:1-155
          1. region a:1-155 [135328] picpiclink
        3. 2gkc picpic
          automatically matched to 1ZXF A:1-155
          complexed with ccg
          1. region a:1-155 [135327] picpiclink
    6. Activator of 90 kda heat shock protein ATPase homolog 1, AHSA1 [143833]
      1. Human (Homo sapiens) [TaxId: 9606] [143834] (1)
        SQ O95433 204-335
        1. 1x53 picpic
          1. region a:8-139 [121703] picpiclink
    7. Hypothetical protein CV1439 [143835]
      1. Chromobacterium violaceum [TaxId: 536] [143836] (6)
        SQ Q7NY36 2-144
        1. 1z94 picpic
          1. region a:2-144 [124740] picpiclink
        2. 1z94 picpic
          automatically matched to 1Z94 A:2-144
          1. region b:2-144 [124741] picpiclink
        3. 1z94 picpic
          automatically matched to 1Z94 A:2-144
          1. region c:2-144 [124742] picpiclink
        4. 1z94 picpic
          automatically matched to 1Z94 A:2-144
          1. region d:2-144 [124743] picpiclink
        5. 1z94 picpic
          automatically matched to 1Z94 A:2-144
          1. region e:2-144 [124744] picpiclink
        6. 1z94 picpic
          automatically matched to 1Z94 A:2-144
          1. region f:2-144 [124745] picpiclink
    8. Hypothetical protein EF2215 [160732]
      1. Enterococcus faecalis [TaxId: 1351] [160733] (1)
        SQ Q832L1 1-160
        1. 2nn5 picpic
          complexed with edo, mg
          1. region a:1-160 [148294] picpiclink
    9. Uncharacterized protein SPO3351 [160734]
      1. Silicibacter pomeroyi [TaxId: 89184] [160735] (1)
        SQ Q5LN61 2-144
        1. 3eli picpic
          1. region a:2-144 [158184] picpiclink
    10. Hypothetical protein SA2116 [160736]
      1. Staphylococcus aureus [TaxId: 1280] [160737] (1)
        SQ Q2FEH1 5-168
        1. 2il5 picpic
          complexed with na
          1. region a:5-168 [147723] picpiclink
    11. Uncharacterized protein BPP1335 [160738]
      1. Bordetella parapertussis [TaxId: 519] [160739] (1)
        SQ Q7WAN9 1-183
        1. 2k5g picpic
          1. region a:1-183 [148273] picpiclink
  6. oligoketide cyclase/dehydrase-like [118101] (3)
    Pfam 03654
    1. Hypothetical protein CC1736 [118102]
      1. Caulobacter crescentus [TaxId: 155892] [118103] (1)
        SQ Q9A7I7
        1. 1t17 picpic
          structural genomics target
          1. chain a [112215] picpiclink
    2. Hypothetical protein TTHA0849 [143837]
      1. Thermus thermophilus [TaxId: 274] [143838] (4)
        SQ Q5SK03 2-147
        1. 2d4r picpic
          complexed with so4
          1. region a:2-147 [131256] picpiclink
        2. 2d4r picpic
          automatically matched to 2D4R A:2-147
          complexed with so4
          1. region b:2-147 [131257] picpiclink
        3. 2d4r picpic
          automatically matched to 2D4R A:2-147
          complexed with so4
          1. region c:2-146 [131258] picpiclink
        4. 2d4r picpic
          automatically matched to 2D4R A:2-147
          complexed with so4
          1. region d:2-147 [131259] picpiclink
    3. Multifunctional enzyme TcmN, cyclase/aromatase domain [160740]
      1. Streptomyces glaucescens [TaxId: 1907] [160741] (3)
        SQ P16559 1-152! SQ P16559 1-155
        1. 2rer picpic
          1. region a:1-155 [151981] picpiclink
        2. 2rez picpic
          automatically matched to 2RER A:1-155
          complexed with act, iod
          1. region a:1-152 [151992] picpiclink
        3. 2res picpic
          mutant
          1. region a:1-152 [151982] picpiclink
  7. PA1206-like [143839] (1)
    1. Hypothetical protein PA1206 [143840]
      1. Pseudomonas aeruginosa [TaxId: 287] [143841] (2)
        SQ Q9I4D2 1-151
        1. 2ffs picpic
          1. region a:1-151 [133391] picpiclink
        2. 2ffs picpic
          automatically matched to 2FFS A:1-151
          1. region b:1-149 [133392] picpiclink
  8. Atu1531-like [160742] (2)
    Pfam 10604; Polyketide cyclase/dehydrase and lipid transport
    1. Uncharacterized protein XoxI [160743]
      1. Bacillus cereus [TaxId: 1396] [160744] (2)
        SQ Q81AY6 3-140
        1. 3cnw picpic
          1. region a:3-140 [156848] picpiclink
        2. 3cnw picpic
          automatically matched to 3CNW A:3-140
          1. region b:3-140 [156849] picpiclink
    2. Uncharacterized protein Atu1531 [160745]
      1. Agrobacterium tumefaciens [TaxId: 358] [160746] (2)
        SQ Q7CZ16 1-133
        1. 2qpv picpic
          complexed with acy
          1. region a:1-133 [151215] picpiclink
        2. 2qpv picpic
          automatically matched to 2QPV A:1-133
          complexed with acy
          1. region b:1-133 [151216] picpiclink
  9. Smu440-like [160747] (1)
    PfamB 094079
    1. Hypothetical protein SMU440 [160748]
      1. Streptococcus mutans [TaxId: 1309] [160749] (2)
        SQ Q8DVN6 1-137
        1. 2b79 picpic
          complexed with nh4
          1. region a:1-137 [146089] picpiclink
        2. 2b79 picpic
          automatically matched to 2B79 A:1-137
          complexed with nh4
          1. region b:1-137 [146090] picpiclink
  10. CoxG-like [160750] (2)
    Pfam 06240
    1. Hypothetical protein APE2225 [160751]
      1. Aeropyrum pernix [TaxId: 56636] [160752] (2)
        SQ Q9Y9R3 1-147
        1. 2ns9 picpic
          complexed with po4
          1. region a:10-156 [148382] picpiclink
        2. 2ns9 picpic
          automatically matched to 2NS9 A:10-156
          complexed with po4
          1. region b:10-153 [148383] picpiclink
    2. Hypothetical protein GKP20 [160753]
      1. Geobacillus kaustophilus [TaxId: 1462] [160754] (1)
        SQ Q5QL47 1-147
        1. 2pcs picpic
          complexed with unl
          1. region a:1-147 [149386] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk