Structural Classification of Proteins

Superfamily: Bet v1-like

: contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold: TBP-like [55944]
beta-alpha-beta(4)-alpha
Superfamily: Bet v1-like [55961]
contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
uperfamily

Families:

Pathogenesis-related protein 10 (PR10)-like [55962] (8)
1. Major tree pollen allergen [55963]
  1. White birch (Betula verrucosa), Bet v 1 [TaxId: 3505] [55964] (5)
  2. European white birch (Betula pendula), Bet v I-a [TaxId: 3505] [55965] (1)
  3. European white birch (Betula pendula), Bet v 1-l [TaxId: 3505] [82782] (1)
  4. Sweet cherry (Prunus avium), pru av 1 [TaxId: 42229] [64387] (2)
2. Plant pathogenesis-related protein PR10 [75543]
  1. Yellow lupine (Lupinus luteus) [TaxId: 3873] [75544] (4)
  2. Jicama (Pachyrhizus erosus), SPE-16 [TaxId: 109171] [143818] (4)
    SQ Q6T6J0 2-148
3. Hypothetical protein At1G24000 [103251]
  1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [103252] (3)
4. Major allergen api g 1 [143819]
  1. Celery (Apium graveolens) [TaxId: 4045] [143820] (2)
    SQ P49372 2-154
STAR domain [55966] (4)
1. Lipid transport domain of Mln64 [55967]
  1. Human (Homo sapiens) [TaxId: 9606] [55968] (1)
2. Cholesterol-regulated Start protein 4 (Stard4). [75545]
  1. Mouse (Mus musculus) [TaxId: 10090] [75546] (1)
3. Phosphatidylcholine transfer protein [75547]
  1. Human (Homo sapiens) [TaxId: 9606] [75548] (3)
4. Star-related lipid transfer protein 13 [160730]
  1. Human (Homo sapiens) [TaxId: 9606] [160731] (3)
    SQ Q9Y3M8 908-1104
Phoshatidylinositol transfer protein, PITP [64388] (4)
1. Phoshatidylinositol transfer protein, PITP [64389]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [64390] (1)
  2. Mouse (Mus musculus) [TaxId: 10090] [75549] (1)
  3. Human (Homo sapiens) [TaxId: 9606] [103253] (1)
  4. Rat (Rattus norvegicus), beta isoform [TaxId: 10116] [143821] (1)
    SQ P53812 1-270
Ring hydroxylating alpha subunit catalytic domain [55969] (7)
Pfam 00848; contains a few insertion and C-terminal extension compared with Bet v1
1. Naphthalene 1,2-dioxygenase alpha subunit, C-domain [55970]
  1. Pseudomonas putida [TaxId: 303] [55971] (16)
  2. Rhodococcus sp. ncimb12038 [TaxId: 92694] [143822] (6)
    SQ Q9X3R9 163-441
2. Biphenyl dioxygenase large subunit BphA1, C-terminal domain [111166]
  1. Rhodococcus sp. (strain RHA1) [TaxId: 101510] [111167] (2)
    SQ Q53122 17-451
3. 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO [143823]
  1. Pseudomonas putida [TaxId: 303] [143824] (1)
    SQ O05935 164-442
4. Large subunit of cumene dioxygenase cumA1 [143825]
  1. Pseudomonas fluorescens [TaxId: 294] [143826] (1)
    SQ Q51743 181-459
5. Terminal oxygenase component of carbazole CarAa [143827]
  1. Janthinobacterium sp. j3 [TaxId: 213804] [143828] (10)
    SQ Q84II6 143-384
6. Nitrobenzene dioxygenase alpha subunit, NBDO-alpha [143829]
  1. Comamonas sp. JS765 [TaxId: 58226] [143830] (3)
    SQ Q8RTL4 153-439
AHSA1 domain [111168] (11)
Pfam 05146
1. Hypothetical protein NE0264 [111169]
  1. Nitrosomonas europaea [TaxId: 915] [111170] (1)
    SQ Q82XK1
2. Hypothetical protein MM0500 [118095]
  1. Methanosarcina mazei [TaxId: 2209] [118096] (1)
    SQ Q8PZJ2
3. Hypothetical protein BH1534 [118097]
  1. Bacillus halodurans [TaxId: 86665] [118098] (1)
    SQ Q9KCN5
4. Hypothetical protein BC4709 [118099]
  1. Bacillus cereus [TaxId: 1396] [118100] (1)
    SQ Q816V6
5. Calicheamicin gene cluster protein CalC [143831]
  possible link between the AHSA1 (Pfam 08327) and oligoketide cyclase/dehydrase-like (new Pfam 03364) families
  1. Micromonospora echinospora [TaxId: 1877] [143832] (3)
    SQ Q8KNF0 27-181
6. Activator of 90 kda heat shock protein ATPase homolog 1, AHSA1 [143833]
  1. Human (Homo sapiens) [TaxId: 9606] [143834] (1)
    SQ O95433 204-335
7. Hypothetical protein CV1439 [143835]
  1. Chromobacterium violaceum [TaxId: 536] [143836] (6)
    SQ Q7NY36 2-144
8. Hypothetical protein EF2215 [160732]
  1. Enterococcus faecalis [TaxId: 1351] [160733] (1)
    SQ Q832L1 1-160
9. Uncharacterized protein SPO3351 [160734]
  1. Silicibacter pomeroyi [TaxId: 89184] [160735] (1)
    SQ Q5LN61 2-144
10. Hypothetical protein SA2116 [160736]
  1. Staphylococcus aureus [TaxId: 1280] [160737] (1)
    SQ Q2FEH1 5-168
11. Uncharacterized protein BPP1335 [160738]
  1. Bordetella parapertussis [TaxId: 519] [160739] (1)
    SQ Q7WAN9 1-183
oligoketide cyclase/dehydrase-like [118101] (3)
Pfam 03654
1. Hypothetical protein CC1736 [118102]
  1. Caulobacter crescentus [TaxId: 155892] [118103] (1)
    SQ Q9A7I7
2. Hypothetical protein TTHA0849 [143837]
  1. Thermus thermophilus [TaxId: 274] [143838] (4)
    SQ Q5SK03 2-147
3. Multifunctional enzyme TcmN, cyclase/aromatase domain [160740]
  1. Streptomyces glaucescens [TaxId: 1907] [160741] (3)
    SQ P16559 1-152! SQ P16559 1-155
PA1206-like [143839] (1)
1. Hypothetical protein PA1206 [143840]
  1. Pseudomonas aeruginosa [TaxId: 287] [143841] (2)
    SQ Q9I4D2 1-151
Atu1531-like [160742] (2)
Pfam 10604; Polyketide cyclase/dehydrase and lipid transport
1. Uncharacterized protein XoxI [160743]
  1. Bacillus cereus [TaxId: 1396] [160744] (2)
    SQ Q81AY6 3-140
2. Uncharacterized protein Atu1531 [160745]
  1. Agrobacterium tumefaciens [TaxId: 358] [160746] (2)
    SQ Q7CZ16 1-133
Smu440-like [160747] (1)
PfamB 094079
1. Hypothetical protein SMU440 [160748]
  1. Streptococcus mutans [TaxId: 1309] [160749] (2)
    SQ Q8DVN6 1-137
CoxG-like [160750] (2)
Pfam 06240
1. Hypothetical protein APE2225 [160751]
  1. Aeropyrum pernix [TaxId: 56636] [160752] (2)
    SQ Q9Y9R3 1-147
2. Hypothetical protein GKP20 [160753]
  1. Geobacillus kaustophilus [TaxId: 1462] [160754] (1)
    SQ Q5QL47 1-147