Structural Classification of Proteins
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Family: Ring hydroxylating alpha subunit catalytic domain

Pfam 00848; contains a few insertion and C-terminal extension compared with Bet v1

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: TBP-like [55944]
    beta-alpha-beta(4)-alpha
  4. Superfamily: Bet v1-like [55961]
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
    link to SUPERFAMILY database - Superfamily
  5. Family: Ring hydroxylating alpha subunit catalytic domain [55969]
    Pfam 00848; contains a few insertion and C-terminal extension compared with Bet v1

Protein Domains:

  1. Naphthalene 1,2-dioxygenase alpha subunit, C-domain [55970]
    1. Pseudomonas putida [TaxId: 303] [55971] (16)
      1. 1o7n picpicxrefxref
        complexed with edo, fe, fes, ind, oxy, so4
        1. region a:155-448 [81163] picpiclink
      2. 2hmj picpicxrefxref
        automatically matched to d1o7ga2
        complexed with edo, fe, fes, so4; mutant
        1. region a:155-446 [136586] picpiclink
      3. 2hmo picpicxrefxref
        automatically matched to d1o7ga2
        complexed with 3nt, edo, fe, fes, so4
        1. region a:155-446 [136601] picpiclink
      4. 2hmm picpicxrefxref
        automatically matched to d1o7ga2
        complexed with an3, edo, fe, fes, so4; mutant
        1. region a:155-446 [136595] picpiclink
      5. 2hmk picpicxrefxref
        automatically matched to d1o7ga2
        complexed with edo, fe, fes, pey, so4; mutant
        1. region a:155-446 [136589] picpiclink
      6. 2hmn picpicxrefxref
        automatically matched to d1o7ga2
        complexed with an3, edo, fe, fes, so4; mutant
        1. region a:155-446 [136598] picpiclink
      7. 1eg9 picpicxrefxref
        complexed with fes, ind, of1, so4
        1. region a:155-447 [41322] picpiclink
      8. 1o7g picpicxrefxref
        complexed with edo, fe, fes, npy, so4
        1. region a:155-448 [81135] picpiclink
      9. 1uuv picpicxrefxref
        automatically matched to d1o7ga2
        complexed with edo, fe, fes, ind, no, so4
        1. region a:155-447 [119700] picpiclink
      10. 1o7m picpicxrefxref
        complexed with edo, fe, fes, oxy, so4
        1. region a:155-448 [81160] picpiclink
      11. 2hml picpicxrefxref
        automatically matched to d1o7ga2
        complexed with edo, fe, fes, pey, so4; mutant
        1. region a:155-446 [136592] picpiclink
      12. 1o7w picpicxrefxref
        complexed with edo, fe, fes, so4
        1. region a:155-447 [81169] picpiclink
      13. 1o7p picpicxrefxref
        complexed with edo, fe, fes, ndh, so4
        1. region a:155-447 [81166] picpiclink
      14. 1o7h picpicxrefxref
        complexed with edo, fe, fes, so4
        1. region a:155-448 [81138] picpiclink
      15. 1uuw picpicxrefxref
        automatically matched to d1o7ga2
        complexed with fe, fes, no, so4
        1. region a:155-447 [119703] picpiclink
      16. 1ndo picpicxrefxref
        complexed with fe, fes
        1. region a:155-447 [41323] picpiclink
        2. region c:155-447 [41324] picpiclink
        3. region e:155-445 [41325] picpiclink
    2. Rhodococcus sp. ncimb12038 [TaxId: 92694] [143822] (6)
      SQ Q9X3R9 163-441
      1. 2b1x picpicxrefxrefxrefxrefxrefxref
        complexed with fe, fes, mpd
        1. region a:163-441 [127676] picpiclink
      2. 2b1x picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2B1X A:163-441
        complexed with fe, fes, mpd
        1. region c:163-441 [127679] picpiclink
      3. 2b1x picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2B1X A:163-441
        complexed with fe, fes, mpd
        1. region e:163-441 [127682] picpiclink
      4. 2b24 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2B1X A:163-441
        complexed with fe, fes, ind
        1. region a:163-440 [127691] picpiclink
      5. 2b24 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2B1X A:163-441
        complexed with fe, fes, ind
        1. region c:163-440 [127694] picpiclink
      6. 2b24 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2B1X A:163-441
        complexed with fe, fes, ind
        1. region e:163-440 [127697] picpiclink
  2. Biphenyl dioxygenase large subunit BphA1, C-terminal domain [111166]
    1. Rhodococcus sp. (strain RHA1) [TaxId: 101510] [111167] (2)
      SQ Q53122 17-451
      1. 1uli picpicxrefxref
        complexed with fe2, fes
        1. region a:171-451 [107922] picpiclink
        2. region c:171-451 [107925] picpiclink
        3. region e:171-451 [107928] picpiclink
      2. 1ulj picpicxrefxref
        complexed with bnl, fe2, fes
        1. region a:171-451 [107931] picpiclink
        2. region c:171-451 [107934] picpiclink
        3. region e:171-451 [107937] picpiclink
  3. 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO [143823]
    1. Pseudomonas putida [TaxId: 303] [143824] (1)
      SQ O05935 164-442
      1. 1z01 picpicxref
        complexed with fe, fes
        1. region a:164-442 [124297] picpiclink
  4. Large subunit of cumene dioxygenase cumA1 [143825]
    1. Pseudomonas fluorescens [TaxId: 294] [143826] (1)
      SQ Q51743 181-459
      1. 1wql picpicxrefxref
        complexed with fe2, fes, oxy
        1. region a:181-459 [121171] picpiclink
  5. Terminal oxygenase component of carbazole CarAa [143827]
    1. Janthinobacterium sp. j3 [TaxId: 213804] [143828] (10)
      SQ Q84II6 143-384
      1. 2de6 picpicxrefxrefxref
        automatically matched to 1WW9 A:143-384
        complexed with fe2, fes
        1. region a:143-384 [131416] picpiclink
      2. 2de6 picpicxrefxrefxref
        automatically matched to 1WW9 A:143-384
        complexed with fe2, fes
        1. region b:143-384 [131418] picpiclink
      3. 2de6 picpicxrefxrefxref
        automatically matched to 1WW9 A:143-384
        complexed with fe2, fes
        1. region c:143-384 [131420] picpiclink
      4. 2de5 picpicxrefxrefxref
        automatically matched to 1WW9 A:143-384
        complexed with fe2, fes
        1. region a:143-384 [131410] picpiclink
      5. 2de5 picpicxrefxrefxref
        automatically matched to 1WW9 A:143-384
        complexed with fe2, fes
        1. region b:143-384 [131412] picpiclink
      6. 2de5 picpicxrefxrefxref
        automatically matched to 1WW9 A:143-384
        complexed with fe2, fes
        1. region c:143-384 [131414] picpiclink
      7. 1ww9 picpicxref
        complexed with fe2, fes
        1. region a:143-384 [121353] picpiclink
      8. 2de7 picpicxrefxrefxref
        automatically matched to 1WW9 A:143-384
        complexed with 9ca, fe2, fes
        1. region a:143-384 [131422] picpiclink
      9. 2de7 picpicxrefxrefxref
        automatically matched to 1WW9 A:143-384
        complexed with 9ca, fe2, fes
        1. region b:143-384 [131424] picpiclink
      10. 2de7 picpicxrefxrefxref
        automatically matched to 1WW9 A:143-384
        complexed with 9ca, fe2, fes
        1. region c:143-384 [131426] picpiclink
  6. Nitrobenzene dioxygenase alpha subunit, NBDO-alpha [143829]
    1. Comamonas sp. JS765 [TaxId: 58226] [143830] (3)
      SQ Q8RTL4 153-439
      1. 2bmo picpicxrefxref
        complexed with edo, eoh, fe, fes, ni
        1. region a:153-439 [128805] picpiclink
      2. 2bmr picpicxrefxref
        automatically matched to 2BMO A:153-439
        complexed with 3nt, edo, eoh, fe, fes, ni
        1. region a:153-439 [128811] picpiclink
      3. 2bmq picpicxrefxref
        automatically matched to 2BMO A:153-439
        complexed with edo, eoh, fe, fes, nbz, ni
        1. region a:153-439 [128808] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk