Family: DNA polymerase III, beta subunit

duplication: consists of three domains of this fold

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: DNA clamp [55978]
   contains two helices and two beta sheets
   duplication: fold has internal pseudo two-fold symmetry
4. Superfamily: DNA clamp [55979]
   uperfamily
5. Family: DNA polymerase III, beta subunit [55980]
   duplication: consists of three domains of this fold

Protein Domains:

1. DNA polymerase III, beta subunit [55981]
   1. Escherichia coli [TaxId: 562] [55982] (30)
      SQ P00583
      1. 1ok7
         1. region a:1-122 [103992]
         2. region a:123-244 [103993]
         3. region a:245-366 [103994]
         4. region b:1-122 [103995]
         5. region b:123-244 [103996]
         6. region b:245-366 [103997]
      2. 3d1g
         automatically matched to d1jqja1
         complexed with 322
         1. region a:1-122 [157200]
      3. 3d1g
         automatically matched to d1jqja2
         complexed with 322
         1. region a:123-244 [157201]
      4. 3d1g
         automatically matched to d1jqja3
         complexed with 322
         1. region a:245-366 [157202]
      5. 3d1g
         automatically matched to d1jqja1
         complexed with 322
         1. region b:1-122 [157203]
      6. 3d1g
         automatically matched to d1jqja2
         complexed with 322
         1. region b:123-244 [157204]
      7. 3d1g
         automatically matched to d1jqja3
         complexed with 322
         1. region b:245-366 [157205]
      8. 1unn
         complexed with so4
         1. region a:1-122 [99674]
         2. region a:123-244 [99675]
         3. region a:245-366 [99676]
         4. region b:1-122 [99677]
         5. region b:123-244 [99678]
         6. region b:245-366 [99679]
      9. 3bep
         automatically matched to d1jqja1
         complexed with 5cy
         1. region a:1-122 [155190]
      10. 3bep
          automatically matched to d1jqja2
          complexed with 5cy
          1. region a:123-244 [155191]
      11. 3bep
          automatically matched to d1jqja3
          complexed with 5cy
          1. region a:245-366 [155192]
      12. 3bep
          automatically matched to d1jqja1
          complexed with 5cy
          1. region b:1-122 [155193]
      13. 3bep
          automatically matched to d1jqja2
          complexed with 5cy
          1. region b:123-244 [155194]
      14. 3bep
          automatically matched to d1jqja3
          complexed with 5cy
          1. region b:245-366 [155195]
      15. 3d1e
          automatically matched to d1jqja1
          1. region a:1-122 [157188]
      16. 3d1e
          automatically matched to d1jqja2
          1. region a:123-244 [157189]
      17. 3d1e
          automatically matched to d1jqja3
          1. region a:245-366 [157190]
      18. 3d1e
          automatically matched to d1jqja1
          1. region b:1-122 [157191]
      19. 3d1e
          automatically matched to d1jqja2
          1. region b:123-244 [157192]
      20. 3d1e
          automatically matched to d1jqja3
          1. region b:245-366 [157193]
      21. 3d1f
          automatically matched to d1jqja1
          complexed with 323, peg
          1. region a:1-122 [157194]
      22. 3d1f
          automatically matched to d1jqja2
          complexed with 323, peg
          1. region a:123-244 [157195]
      23. 3d1f
          automatically matched to d1jqja3
          complexed with 323, peg
          1. region a:245-366 [157196]
      24. 3d1f
          automatically matched to d1jqja1
          complexed with 323, peg
          1. region b:1-122 [157197]
      25. 3d1f
          automatically matched to d1jqja2
          complexed with 323, peg
          1. region b:123-244 [157198]
      26. 3d1f
          automatically matched to d1jqja3
          complexed with 323, peg
          1. region b:245-366 [157199]
      27. 1mmi
          1. region a:1-122 [91309]
          2. region a:123-244 [91310]
          3. region a:245-366 [91311]
          4. region b:1-122 [91312]
          5. region b:123-244 [91313]
          6. region b:245-366 [91314]
      28. 2pol
          1. region a:1-122 [41356]
          2. region a:123-244 [41357]
          3. region a:245-366 [41358]
          4. region b:1-122 [41359]
          5. region b:123-244 [41360]
          6. region b:245-366 [41361]
      29. 1jql
          mutant
          1. region a:1-122 [63231]
          2. region a:123-244 [63232]
          3. region a:245-366 [63233]
      30. 1jqj
          mutant
          1. region a:1-122 [67091]
          2. region a:123-244 [67092]
          3. region a:245-366 [67093]
          4. region b:1-122 [67094]
          5. region b:123-244 [67095]
          6. region b:245-366 [67096]
   2. Thermotoga maritima [TaxId: 2336] [118108] (1)
      SQ Q9WYA0
      1. 1vpk
         Structural genomics target
         1. region a:1-120 [113963]
         2. region a:121-243 [113964]
         3. region a:244-366 [113965]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk