Structural Classification of Proteins

Superfamily: Molybdenum cofactor-binding domain

: duplication: consists of 4 structural repeats arranged in 2 lobes
contains one left-hand beta-alpha-beta unit per lobe
uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold: Molybdenum cofactor-binding domain [56002]
beta(2)-alpha-beta-alpha-beta; 2 layers: a/b; mixed sheet: order 1243: crossing loops
Superfamily: Molybdenum cofactor-binding domain [56003]
duplication: consists of 4 structural repeats arranged in 2 lobes
contains one left-hand beta-alpha-beta unit per lobe
uperfamily

Families:

Molybdenum cofactor-binding domain [56004] (8)
1. Aldehyde oxidoreductase [56005]
  1. Desulfovibrio gigas [TaxId: 879] [56006] (3)
    SQ Q46509
    1. 1vlb
      complexed with cl, fes, ipa, mg, pcd
      1. region a:311-907 [108742]
    2. 1zcs
      automatically matched to d1sija4
      complexed with ast, cl, fes, ipa, mg, pcd
      1. region a:311-907 [124915]
    3. 1sij
      complexed with ast, cl, fes, mg, pcd
      1. region a:311-907 [105584]
  2. Desulfovibrio desulfuricans [TaxId: 876] [56007] (1)
    1. 1dgj
      complexed with 2mo, fes, mcn
      1. region a:311-906 [41415]
2. Xanthine oxidase, C-terminal domain [56008]
  1. Cow (Bos taurus) [TaxId: 9913] [56009] (6)
    SQ P80457
    1. 1v97
      complexed with acy, ca, fad, fes, fyx, gol, mos, mte
      1. region a:695-1332 [108440]
      2. region b:695-1332 [108446]
    2. 1vdv
      complexed with acy, ca, fad, fes, gol, mos, mte, ysh
      1. region a:695-1332 [113618]
      2. region b:695-1332 [113624]
    3. 1fo4
      complexed with ca, fad, fes, gol, mos, mte, sal
      1. region a:695-1332 [41416]
      2. region b:695-1332 [41417]
    4. 3b9j
      automatically matched to d1fo4a5
      complexed with 290, ca, fad, fes, mos, mte
      1. region c:695-1328 [155005]
    5. 1fiq
      complexed with fad, fes, gol, mos, mte, sal
      1. region c:695-1315 [41418]
    6. 1n5x
      complexed with fad, fes, mos, mte, tei
      1. region a:695-1332 [85346]
      2. region b:695-1332 [85352]
3. Xanthine dehydrogenase chain B, C-terminal domain [69813]
  1. Rhodobacter capsulatus [TaxId: 1061] [69814] (2)
    1. 1jro
      complexed with ca, fad, fes, mos, mpn
      1. region b:124-777 [67142]
      2. region d:124-777 [67148]
      3. region f:124-777 [67154]
      4. region h:124-777 [67160]
    2. 1jrp
      complexed with 141, ca, fad, fes, mos, mpn
      1. region b:124-777 [67166]
      2. region d:124-777 [67172]
      3. region f:124-777 [67178]
      4. region h:124-777 [67184]
4. Carbon monoxide (CO) dehydrogenase molybdoprotein [56010]
  1. Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137] [56011] (6)
    1. 1n62
      complexed with cub, fad, fes, mcn, po4
      1. region b:147-809 [80093]
      2. region e:147-809 [80099]
    2. 1n60
      complexed with fad, fes, mcn, omo, po4
      1. region b:147-809 [80069]
      2. region e:147-809 [80075]
    3. 1n63
      complexed with cun, fad, fes, mcn, po4
      1. region b:147-809 [80105]
      2. region e:147-809 [80111]
    4. 1n61
      complexed with cun, fad, fes, mcn, po4
      1. region b:147-809 [80081]
      2. region e:147-809 [80087]
    5. 1n5w
      complexed with cum, fad, fes, mcn, po4
      1. region b:147-809 [80048]
      2. region e:147-809 [80054]
    6. 1zxi
      automatically matched to d1n5wb2
      complexed with cu, cum, fad, fes, mcn, po4
      1. region b:147-809 [125775]
  2. Hydrogenophaga pseudoflava [TaxId: 47421] [56012] (2)
    1. 1ffv
      complexed with aro, csz, fad, fes, pcd
      1. region b:147-803 [41421]
      2. region e:147-803 [41422]
    2. 1ffu
      complexed with aro, cdp, csz, fad, fes
      1. region b:147-803 [41423]
      2. region e:147-803 [41424]
5. Quinoline 2-oxidoreductase large subunit QorL [111178]
  1. Pseudomonas putida [TaxId: 303] [111179] (1)
    SQ P72224
    1. 1t3q
      complexed with fad, fes, gol, mcn, smo, so4
      1. region b:166-786 [106370]
      2. region e:166-786 [106376]
6. 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain [118109]
  1. Thauera aromatica [TaxId: 59405] [118110] (2)
    SQ O33819
    1. 1rm6
      complexed with cl, epe, fad, fes, fs4, k, na, pcd, so4
      1. region a:134-769 [111873]
      2. region d:134-768 [111879]
    2. 1sb3
      complexed with epe, fad, fes, fs4, pcd, so4
      1. region a:134-769 [112053]
      2. region d:134-768 [112059]