Structural Classification of Proteins
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Family: Tyrosyl-DNA phosphodiesterase TDP1

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Phospholipase D/nuclease [56023]
    beta-alpha-beta-alpha-beta-alpha-beta(4)-alpha; mixed sheet: order 1765234
  4. Superfamily: Phospholipase D/nuclease [56024]
    link to SUPERFAMILY database - Superfamily
  5. Family: Tyrosyl-DNA phosphodiesterase TDP1 [69815]

Protein Domains:

  1. Tyrosyl-DNA phosphodiesterase TDP1 [69816]
    1. Human (Homo sapiens) [TaxId: 9606] [69817] (12)
      1. 1jy1 picpic
        1. region a:145-350 [67438] picpiclink
        2. region a:351-608 [67439] picpiclink
      2. 1rff picpic
        complexed with spm, vo4; mutant
        1. region a:162-350 [97376] picpiclink
        2. region a:351-608 [97377] picpiclink
        3. region b:162-350 [97378] picpiclink
        4. region b:351-607 [97379] picpiclink
      3. 1mu7 picpic
        complexed with gol, wo4; mutant
        1. region a:162-350 [79475] picpiclink
        2. region a:351-608 [79476] picpiclink
        3. region b:158-350 [79477] picpiclink
        4. region b:351-608 [79478] picpiclink
      4. 1rgt picpic
        complexed with otr, ots, spm, vo4; mutant
        1. region a:162-350 [97446] picpiclink
        2. region a:351-608 [97447] picpiclink
        3. region b:162-350 [97448] picpiclink
        4. region b:351-607 [97449] picpiclink
      5. 1mu9 picpic
        complexed with gol, vo4; mutant
        1. region a:162-350 [79479] picpiclink
        2. region a:351-608 [79480] picpiclink
        3. region b:159-350 [79481] picpiclink
        4. region b:351-608 [79482] picpiclink
      6. 1rg1 picpic
        complexed with ots, spm, vo4; mutant
        1. region a:162-350 [97415] picpiclink
        2. region a:351-608 [97416] picpiclink
        3. region b:162-350 [97417] picpiclink
        4. region b:351-607 [97418] picpiclink
      7. 1rg2 picpic
        complexed with otr, ots, spm, vo4; mutant
        1. region a:162-350 [97419] picpiclink
        2. region a:351-608 [97420] picpiclink
        3. region b:159-350 [97421] picpiclink
        4. region b:351-608 [97422] picpiclink
      8. 1qzq picpic
        1. region a:161-350 [96655] picpiclink
        2. region a:351-608 [96656] picpiclink
        3. region b:161-350 [96657] picpiclink
        4. region b:351-608 [96658] picpiclink
      9. 1rfi picpic
        complexed with spm, vo4; mutant
        1. region a:162-350 [97380] picpiclink
        2. region a:351-608 [97381] picpiclink
        3. region b:162-350 [97382] picpiclink
        4. region b:351-607 [97383] picpiclink
      10. 1rgu picpic
        complexed with ots, spm, vo4; mutant
        1. region a:162-350 [97450] picpiclink
        2. region a:351-608 [97451] picpiclink
        3. region b:162-350 [97452] picpiclink
        4. region b:351-607 [97453] picpiclink
      11. 1rh0 picpic
        complexed with ots, spm, vo4; mutant
        1. region a:162-350 [97458] picpiclink
        2. region a:351-608 [97459] picpiclink
        3. region b:162-350 [97460] picpiclink
        4. region b:351-607 [97461] picpiclink
      12. 1nop picpic
        complexed with a topoisomerase I-derived peptide, chain C
        complexed with vo4; mutant
        1. region a:162-350 [85928] picpiclink
        2. region a:351-608 [85929] picpiclink
        3. region b:159-350 [85930] picpiclink
        4. region b:351-607 [85931] picpiclink
    2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [111180] (1)
      SQ P38319 79-538
      1. 1q32 picpic
        1. region a:79-293 [104507] picpiclink
        2. region a:302-538 [104508] picpiclink
        3. region b:79-293 [104509] picpiclink
        4. region b:302-538 [104510] picpiclink
        5. region c:79-293 [104511] picpiclink
        6. region c:302-538 [104512] picpiclink
        7. region d:79-293 [104513] picpiclink
        8. region d:302-538 [104514] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk