Structural Classification of Proteins
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Fold: PurM C-terminal domain-like

3 layers: alpha/beta/alpha; partial topological similarity to the ferredoxin-like fold

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: PurM C-terminal domain-like [56041]
    3 layers: alpha/beta/alpha; partial topological similarity to the ferredoxin-like fold

Superfamilies:

  1. PurM C-terminal domain-like [56042] (1)
    link to SUPERFAMILY database - Superfamily
    1. PurM C-terminal domain-like [56043] (6)
      1. Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain [56044]
        1. Escherichia coli [TaxId: 562] [56045] (1)
          1. 1cli picpicxref
            complexed with so4
            1. region a:171-345 [41459] picpiclink
            2. region b:1171-1345 [41460] picpiclink
            3. region c:2171-2345 [41461] picpiclink
            4. region d:3171-3345 [41462] picpiclink
      2. Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 [103260]
        duplication: tandem repeats of two PurM-like units arranged like the PurM subunits in the dimer
        1. Thermotoga maritima [TaxId: 2336] [103261] (17)
          TM1246
          1. 1vk3 picpicxref
            structural genomics
            complexed with cl
            1. region a:167-345 [100848] picpiclink
            2. region a:508-603 [100849] picpiclink
          2. 2hs3 picpicxrefxref
            automatically matched to d1vk3a3
            complexed with fgr, po4
            1. region a:167-345 [136714] picpiclink
          3. 2hs3 picpicxrefxref
            automatically matched to d1vk3a4
            complexed with fgr, po4
            1. region a:508-603 [136715] picpiclink
          4. 2hs4 picpicxrefxref
            automatically matched to d1vk3a3
            complexed with acp, fgr, mg, po4
            1. region a:167-345 [136718] picpiclink
          5. 2hs4 picpicxrefxref
            automatically matched to d1vk3a4
            complexed with acp, fgr, mg, po4
            1. region a:508-603 [136719] picpiclink
          6. 2hs0 picpicxrefxref
            automatically matched to d1vk3a3
            complexed with atp, mg
            1. region a:167-345 [136710] picpiclink
          7. 2hs0 picpicxrefxref
            automatically matched to d1vk3a4
            complexed with atp, mg
            1. region a:508-603 [136711] picpiclink
          8. 2hry picpicxrefxref
            automatically matched to d1vk3a3
            complexed with acp, mg, po4; mutant
            1. region a:167-345 [136706] picpiclink
          9. 2hry picpicxrefxref
            automatically matched to d1vk3a4
            complexed with acp, mg, po4; mutant
            1. region a:508-603 [136707] picpiclink
          10. 2hru picpicxrefxref
            automatically matched to d1vk3a3
            complexed with adp, mg; mutant
            1. region a:167-345 [136701] picpiclink
          11. 2hru picpicxrefxref
            automatically matched to d1vk3a4
            complexed with adp, mg; mutant
            1. region a:508-603 [136702] picpiclink
          12. 3d54 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1vk3a3
            complexed with adp, na
            1. region a:167-345 [157327] picpiclink
          13. 3d54 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1vk3a4
            complexed with adp, na
            1. region a:508-603 [157328] picpiclink
          14. 3d54 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1vk3a3
            complexed with adp, na
            1. region e:167-345 [157331] picpiclink
          15. 3d54 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1vk3a4
            complexed with adp, na
            1. region e:508-603 [157332] picpiclink
          16. 3d54 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1vk3a3
            complexed with adp, na
            1. region i:167-345 [157335] picpiclink
          17. 3d54 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1vk3a4
            complexed with adp, na
            1. region i:508-603 [157336] picpiclink
      3. FGAM synthase PurL, PurM-like module, C1 and C2 domains [111181]
        1. Salmonella typhimurium [TaxId: 90371] [111182] (1)
          SQ P74881
          1. 1t3t picpicxrefxrefxrefxref
            complexed with adp, mg, so4
            1. region a:430-616 [106386] picpiclink
            2. region a:817-1033 [106387] picpiclink
      4. Thiamine monophosphate kinase (ThiL) C-terminal domain [118111]
        1. Aquifex aeolicus [TaxId: 63363] [118112] (9)
          SQ O67883
          1. 3c9u picpicxrefxref
            automatically matched to d1vqva2
            complexed with adp, mg, tpp
            1. region a:138-300 [156145] picpiclink
          2. 3c9u picpicxrefxref
            automatically matched to d1vqva2
            complexed with adp, mg, tpp
            1. region b:138-300 [156147] picpiclink
          3. 3c9s picpicxrefxref
            automatically matched to d1vqva2
            complexed with acp, mg
            1. region a:138-300 [156137] picpiclink
          4. 3c9s picpicxrefxref
            automatically matched to d1vqva2
            complexed with acp, mg
            1. region b:138-297 [156139] picpiclink
          5. 3c9r picpicxrefxref
            automatically matched to d1vqva2
            complexed with atp, mg
            1. region a:138-300 [156133] picpiclink
          6. 3c9r picpicxrefxref
            automatically matched to d1vqva2
            complexed with atp, mg
            1. region b:138-297 [156135] picpiclink
          7. 3c9t picpicxrefxref
            automatically matched to d1vqva2
            complexed with acp, mg, tps
            1. region a:138-300 [156141] picpiclink
          8. 3c9t picpicxrefxref
            automatically matched to d1vqva2
            complexed with acp, mg, tps
            1. region b:138-300 [156143] picpiclink
          9. 1vqv picpicxref
            structural genomics target
            complexed with po4
            1. region a:138-300 [114025] picpiclink
            2. region b:138-300 [114027] picpiclink
      5. Hydrogenase expression/formation protein HypE [160783]
        1. Thermococcus kodakaraensis [TaxId: 311400] [160784] (2)
          SQ Q5JII7 156-334
          1. 2z1e picpicxref
            1. region a:156-334 [153933] picpiclink
          2. 2z1f picpicxref
            automatically matched to 2Z1E A:156-334
            1. region a:156-334 [153935] picpiclink
      6. Selenide, water dikinase SelD [160785]
        1. Aquifex aeolicus [TaxId: 63363] [160786] (7)
          SQ O67139 155-336
          1. 2zod picpicxrefxref
            automatically matched to 2YYE A:155-336
            complexed with so4; mutant
            1. region a:155-336 [154719] picpiclink
          2. 2zod picpicxrefxref
            automatically matched to 2YYE A:155-336
            complexed with so4; mutant
            1. region b:155-336 [154721] picpiclink
          3. 2zau picpicxrefxrefxref
            complexed with po4
            1. region a:155-336 [154287] picpiclink
          4. 2zau picpicxrefxrefxref
            automatically matched to 2ZAU A:155-336
            complexed with po4
            1. region b:155-336 [154289] picpiclink
          5. 2zau picpicxrefxrefxref
            automatically matched to 2ZAU A:155-336
            complexed with po4
            1. region c:155-336 [154291] picpiclink
          6. 2yye picpicxrefxref
            complexed with apc, co, po4
            1. region a:155-336 [153832] picpiclink
          7. 2yye picpicxrefxref
            automatically matched to 2YYE A:155-336
            complexed with apc, co, po4
            1. region b:155-336 [153834] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk