Structural Classification of Proteins

Superfamily: Ribosomal protein S5 domain 2-like

: uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold: Ribosomal protein S5 domain 2-like [54210]
core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover
Superfamily: Ribosomal protein S5 domain 2-like [54211]
uperfamily

Families:

Translational machinery components [54212] (8)
1. Elongation factor G (EF-G), domain IV [54213]
  1. Thermus thermophilus [TaxId: 274] [54214] (9)
    1. 2bv3
      automatically matched to d1dar_3
      complexed with gnp, mg; mutant
      1. region a:479-599 [129239]
    2. 2efg
      complexed with gdp
      1. region a:476-599 [37548]
    3. 2bm0
      automatically matched to d1dar_3
      complexed with gdp, mg; mutant
      1. region a:479-599 [128750]
    4. 1fnm
      complexed with gdp, mg; mutant
      1. region a:483-599 [37546]
    5. 1dar
      complexed with gdp
      1. region a:476-599 [37547]
    6. 2bm1
      automatically matched to d1dar_3
      complexed with gdp, mg; mutant
      1. region a:479-599 [128755]
    7. 1efg
      complexed with gdp
      1. region a:477-599 [37550]
    8. 1elo
      1. region a:476-599 [37549]
    9. 1ktv
      1. region a:476-599 [91029]
      2. region b:476-599 [91033]
  2. Thermus thermophilus, EF-G-2 [TaxId: 274] [142925] (2)
    SQ Q5SI76 448-562
    TTHA1498
    1. 2dy1
      automatically matched to d1wdta3
      complexed with gtp, mg
      1. region a:455-569 [146609]
    2. 1wdt
      complexed with gtp, mg
      1. region a:455-569 [120913]
2. Elongation factor 2 (eEF-2), domain IV [82575]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [82576] (22)
    SQ P32324
    1. 1n0u
      complexed with so1
      1. region a:561-725 [79759]
    2. 1u2r
      complexed with apr, dde, gdp, mg, so1
      1. region a:561-725 [107619]
    3. 1n0v
      1. region c:561-725 [79764]
      2. region d:561-725 [79769]
    4. 2npf
      automatically matched to d1n0ua3
      complexed with gdp, mou
      1. region a:561-725 [138434]
    5. 2npf
      automatically matched to d1n0ua3
      complexed with gdp, mou
      1. region b:561-725 [138439]
    6. 1zm9
      automatically matched to d1n0ua3
      complexed with dde, p34
      1. region a:561-725 [125338]
    7. 1zm9
      automatically matched to d1n0ua3
      complexed with dde, p34
      1. region c:561-725 [125344]
    8. 1zm9
      automatically matched to d1n0ua3
      complexed with dde, p34
      1. region e:561-725 [125350]
    9. 1zm4
      automatically matched to d1n0ua3
      complexed with dde, tad
      1. region a:561-725 [125318]
    10. 1zm4
      automatically matched to d1n0ua3
      complexed with dde, tad
      1. region c:561-725 [125324]
    11. 1zm4
      automatically matched to d1n0ua3
      complexed with dde, tad
      1. region e:561-725 [125330]
    12. 2e1r
      automatically matched to d1n0ua3
      complexed with gdp, sod
      1. region a:561-725 [131968]
    13. 1zm3
      automatically matched to d1n0ua3
      complexed with dde
      1. region a:561-725 [125300]
    14. 1zm3
      automatically matched to d1n0ua3
      complexed with dde
      1. region c:561-725 [125306]
    15. 1zm3
      automatically matched to d1n0ua3
      complexed with dde
      1. region e:561-725 [125312]
    16. 1zm2
      automatically matched to d1n0ua3
      complexed with apr, dde
      1. region a:561-725 [125282]
    17. 1zm2
      automatically matched to d1n0ua3
      complexed with apr, dde
      1. region c:561-725 [125288]
    18. 1zm2
      automatically matched to d1n0ua3
      complexed with apr, dde
      1. region e:561-725 [125294]
    19. 2p8z
      automatically matched to d1n0ua3
      complexed with apr, dde, gnp, so1
      1. region t:561-724 [139553]
    20. 2p8x
      automatically matched to d1n0ua3
      complexed with apr, dde, gnp
      1. region t:561-724 [139543]
    21. 2p8y
      automatically matched to d1n0ua3
      complexed with apr, dde, gdp, so1
      1. region t:561-724 [139548]
    22. 2p8w
      automatically matched to d1n0ua3
      complexed with gnp
      1. region t:561-724 [139538]
3. Ribosomal protein S5, C-terminal domain [54215]
  1. Bacillus stearothermophilus [TaxId: 1422] [54216] (1)
    1. 1pkp
      1. region a:78-148 [37551]
  2. Thermus thermophilus [TaxId: 274] [54217] (36)
    SQ P27152 ! SQ P80373
    1. 2uub
      automatically matched to d1i94e1
      complexed with 6mz, cm0, k, mg, par, zn
      1. region e:74-154 [139936]
    2. 1fjg
      complexed with mg, par, scm, sry, zn
      1. region e:74-154 [37553]
    3. 1j5e
      complexed with unx, zn
      1. region e:74-154 [71547]
    4. 2uxc
      automatically matched to d1i94e1
      complexed with k, mg, par, zn
      1. region e:74-154 [140007]
    5. 2uuc
      automatically matched to d1i94e1
      complexed with 6mz, cm0, k, mg, par, zn
      1. region e:74-154 [139956]
    6. 2uua
      automatically matched to d1i94e1
      complexed with 6mz, cm0, k, mg, par, zn
      1. region e:74-154 [139916]
    7. 1xmq
      complexed with mg, par, t6a, zn
      1. region e:74-154 [115533]
    8. 1n32
      complexed with mg, par, psu, zn
      1. region e:74-154 [79873]
    9. 2uu9
      automatically matched to d1i94e1
      complexed with 6mz, cm0, k, mg, par, zn
      1. region e:74-154 [139896]
    10. 1xnq
      complexed with mg, par, zn
      1. region e:74-154 [115607]
    11. 1xnr
      complexed with mg, par, zn
      1. region e:74-154 [115629]
    12. 1hr0
      complexed with mg, zn
      1. region e:74-154 [37554]
    13. 1hnz
      complexed with hyg, mg, zn
      1. region e:74-154 [37555]
    14. 2j02
      automatically matched to d1i94e1
      complexed with 5mu, mg, par, zn
      1. region e:74-154 [137869]
    15. 2j00
      automatically matched to d1i94e1
      complexed with 5mu, mg, par, zn
      1. region e:74-154 [137842]
    16. 1xmo
      complexed with mg, mnu, par, t6a, zn
      1. region e:74-154 [115503]
    17. 1hnw
      complexed with mg, tac, zn
      1. region e:74-154 [37556]
    18. 2e5l
      automatically matched to d1i94e1
      complexed with zn
      1. region e:74-154 [132028]
    19. 1i94
      complexed with mg, wo2, zn
      1. region e:74-157 [61995]
    20. 1hnx
      complexed with mg, pcy, zn
      1. region e:74-154 [37557]
    21. 1n33
      complexed with mg, par, psu, zn
      1. region e:74-154 [79895]
    22. 2hhh
      automatically matched to d1i94e1
      complexed with ksg
      1. region e:74-154 [136480]
    23. 1i96
      complexed with mg, wo2, zn
      1. region e:74-157 [62039]
    24. 1n34
      complexed with zn
      1. region e:74-154 [79917]
    25. 1i97
      complexed with mg, tac, wo2, zn
      1. region e:74-157 [62062]
    26. 1n36
      complexed with zn
      1. region e:74-154 [79940]
    27. 1i95
      complexed with ede, mg, wo2, zn
      1. region e:74-157 [62017]
    28. 2f4v
      automatically matched to d1i94e1
      complexed with ab9, d2c, k, mg, zn
      1. region e:74-154 [132941]
    29. 2hgp
      automatically matched to d1i94e1
      1. region h:74-154 [136424]
    30. 2hgi
      automatically matched to d1i94e1
      1. region h:74-154 [136403]
    31. 2hgr
      automatically matched to d1i94e1
      1. region h:74-154 [136445]
    32. 2ow8
      automatically matched to d1i94e1
      complexed with 2mg, 4oc, 4su, 5mc, 5mu, 7mg, h2u, m2g, ma6, mia, psu, ur3
      1. region f:74-154 [139402]
    33. 1yl4
      automatically matched to d1i94e1
      1. region h:74-154 [123600]
    34. 2b64
      automatically matched to d1i94e1
      complexed with psu, yyg
      1. region e:74-154 [127936]
    35. 2b9o
      automatically matched to d1i94e1
      complexed with psu, yyg
      1. region e:74-154 [128166]
    36. 2b9m
      automatically matched to d1i94e1
      complexed with psu, yyg
      1. region e:74-154 [128129]
  3. Escherichia coli [TaxId: 562] [159906] (24)
    SQ P0A7W1 78-158
    1. 2qal
      automatically matched to 2AVY E:78-158
      complexed with mg, nmy
      1. region e:78-158 [150217]
    2. 2qan
      automatically matched to 2AVY E:78-158
      complexed with mg, nmy
      1. region e:78-158 [150271]
    3. 2qbf
      automatically matched to 2AVY E:78-158
      complexed with mg
      1. region e:78-158 [150491]
    4. 2qbd
      automatically matched to 2AVY E:78-158
      complexed with mg
      1. region e:78-158 [150437]
    5. 1vs5
      automatically matched to 2AVY E:78-158
      complexed with ksg, mg
      1. region e:78-158 [144439]
    6. 3df1
      automatically matched to 2AVY E:78-158
      complexed with hyg, mg
      1. region e:78-158 [157606]
    7. 3df3
      automatically matched to 2AVY E:78-158
      complexed with hyg, mg
      1. region e:78-158 [157660]
    8. 1vs7
      automatically matched to 2AVY E:78-158
      complexed with ksg, mg
      1. region e:78-158 [144480]
    9. 2qoy
      automatically matched to 2AVY E:78-158
      complexed with mg, nmy, scm
      1. region e:78-158 [151094]
    10. 2qp0
      automatically matched to 2AVY E:78-158
      complexed with mg, nmy, scm
      1. region e:78-158 [151147]
    11. 2avy
      Representative structure
      complexed with mg
      1. region e:78-158 [144846]
    12. 2aw7
      automatically matched to 2AVY E:78-158
      complexed with mg
      1. region e:78-158 [144889]
    13. 2qb9
      automatically matched to 2AVY E:78-158
      complexed with lll, mg
      1. region e:78-158 [150331]
    14. 2qbb
      automatically matched to 2AVY E:78-158
      complexed with lll, mg
      1. region e:78-158 [150384]
    15. 2i2p
      automatically matched to 2AVY E:78-158
      complexed with mg
      1. region e:78-158 [145424]
    16. 2i2u
      automatically matched to 2AVY E:78-158
      complexed with mg
      1. region e:78-158 [145466]
    17. 2qbh
      automatically matched to 2AVY E:78-158
      complexed with lll, mg
      1. region e:78-158 [150545]
    18. 2qbj
      automatically matched to 2AVY E:78-158
      complexed with lll, mg
      1. region e:78-158 [150599]
    19. 2qou
      automatically matched to 2AVY E:78-158
      complexed with mg, scm
      1. region e:78-158 [150988]
    20. 2qow
      automatically matched to 2AVY E:78-158
      complexed with mg, scm
      1. region e:78-158 [151041]
    21. 2z4m
      automatically matched to 2AVY E:78-158
      complexed with mg, par
      1. region e:78-158 [154109]
    22. 2vho
      automatically matched to 2AVY E:78-158
      complexed with mg
      1. region e:78-158 [153126]
    23. 2z4k
      automatically matched to 2AVY E:78-158
      complexed with mg, par
      1. region e:78-158 [154055]
    24. 2vhp
      automatically matched to 2AVY E:78-158
      complexed with mg
      1. region e:78-158 [153148]
4. Ribosomal protein S9 [54218]
  1. Thermus thermophilus [TaxId: 274] [54219] (39)
    SQ P80374
    1. 2vqe
      automatically matched to d1fjgi_
      complexed with k, mg, par, tm2, zn
      1. region i:2-128 [153433]
    2. 1fjg
      complexed with mg, par, scm, sry, zn
      1. chain i [37559]
    3. 2vqf
      automatically matched to d1fjgi_
      complexed with k, mg, par, tm2, zn
      1. region i:2-128 [153452]
    4. 1j5e
      complexed with unx, zn
      1. chain i [71552]
    5. 2uxc
      automatically matched to d1fjgi_
      complexed with k, mg, par, zn
      1. region i:2-128 [140012]
    6. 1xmq
      complexed with mg, par, t6a, zn
      1. chain i [115538]
    7. 1n32
      complexed with mg, par, psu, zn
      1. chain i [79878]
    8. 1xnq
      complexed with mg, par, zn
      1. chain i [115612]
    9. 1xnr
      complexed with mg, par, zn
      1. chain i [115634]
    10. 1hr0
      complexed with mg, zn
      1. chain i [37560]
    11. 1hnz
      complexed with hyg, mg, zn
      1. chain i [37561]
    12. 2j02
      automatically matched to d1fjgi_
      complexed with 5mu, mg, par, zn
      1. region i:2-128 [137874]
    13. 2j00
      automatically matched to d1fjgi_
      complexed with 5mu, mg, par, zn
      1. region i:2-128 [137847]
    14. 2uxd
      automatically matched to d1fjgi_
      complexed with k, mg, par, zn
      1. region i:2-128 [152289]
    15. 1xmo
      complexed with mg, mnu, par, t6a, zn
      1. chain i [115508]
    16. 1hnw
      complexed with mg, tac, zn
      1. chain i [37562]
    17. 2e5l
      automatically matched to d1fjgi_
      complexed with zn
      1. region i:2-128 [132033]
    18. 3d5a
      automatically matched to d1fjgi_
      complexed with mg, zn
      1. region i:2-128 [157343]
    19. 3d5c
      automatically matched to d1fjgi_
      complexed with mg, zn
      1. region i:2-128 [157373]
    20. 1i94
      complexed with mg, wo2, zn
      1. chain i [62000]
    21. 1hnx
      complexed with mg, pcy, zn
      1. chain i [37563]
    22. 1n33
      complexed with mg, par, psu, zn
      1. chain i [79900]
    23. 2hhh
      automatically matched to d1fjgi_
      complexed with ksg
      1. region i:2-128 [136485]
    24. 1i96
      complexed with mg, wo2, zn
      1. chain i [62044]
    25. 2uxb
      automatically matched to d1fjgi_
      complexed with k, mg, par, zn
      1. region i:2-128 [152270]
    26. 1n34
      complexed with zn
      1. chain i [79922]
    27. 2v46
      automatically matched to d1fjgi_
      complexed with 5mu, mg, zn
      1. region i:2-128 [152491]
    28. 2v48
      automatically matched to d1fjgi_
      complexed with 5mu, mg, zn
      1. region i:2-128 [152527]
    29. 1i97
      complexed with mg, tac, wo2, zn
      1. chain i [62067]
    30. 1n36
      complexed with zn
      1. chain i [79945]
    31. 1i95
      complexed with ede, mg, wo2, zn
      1. chain i [62022]
    32. 2f4v
      automatically matched to d1fjgi_
      complexed with ab9, d2c, k, mg, zn
      1. region i:2-128 [132946]
    33. 2qnh
      automatically matched to d1fjgi_
      complexed with 2mg, 5mc, 7mg, m2g, ma6, psu
      1. region j:2-128 [150933]
    34. 2ow8
      automatically matched to d1fjgi_
      complexed with 2mg, 4oc, 4su, 5mc, 5mu, 7mg, h2u, m2g, ma6, mia, psu, ur3
      1. region j:2-128 [139407]
    35. 2r1g
      automatically matched to d1fjgi_
      1. region g:2-128 [151522]
    36. 1yl4
      automatically matched to d1fjgi_
      1. region l:2-128 [123605]
    37. 2b64
      automatically matched to d1fjgi_
      complexed with psu, yyg
      1. region i:2-128 [127941]
    38. 2b9o
      automatically matched to d1fjgi_
      complexed with psu, yyg
      1. region i:2-128 [128171]
    39. 2b9m
      automatically matched to d1fjgi_
      complexed with psu, yyg
      1. region i:2-128 [128134]
  2. Escherichia coli [TaxId: 562] [159907] (26)
    SQ P0A7X3 3-129
    1. 2gy9
      automatically matched to 2AVY I:3-129
      1. region i:4-129 [145234]
    2. 2gyb
      automatically matched to 2AVY I:3-129
      1. region i:4-129 [145256]
    3. 2qal
      automatically matched to 2AVY I:3-129
      complexed with mg, nmy
      1. region i:3-129 [150222]
    4. 2qan
      automatically matched to 2AVY I:3-129
      complexed with mg, nmy
      1. region i:3-129 [150276]
    5. 2qbf
      automatically matched to 2AVY I:3-129
      complexed with mg
      1. region i:3-129 [150496]
    6. 2qbd
      automatically matched to 2AVY I:3-129
      complexed with mg
      1. region i:3-129 [150442]
    7. 1vs5
      automatically matched to 2AVY I:3-129
      complexed with ksg, mg
      1. region i:3-129 [144443]
    8. 3df1
      automatically matched to 2AVY I:3-129
      complexed with hyg, mg
      1. region i:3-129 [157611]
    9. 3df3
      automatically matched to 2AVY I:3-129
      complexed with hyg, mg
      1. region i:3-129 [157665]
    10. 1vs7
      automatically matched to 2AVY I:3-129
      complexed with ksg, mg
      1. region i:3-129 [144484]
    11. 2qoy
      automatically matched to 2AVY I:3-129
      complexed with mg, nmy, scm
      1. region i:3-129 [151099]
    12. 2qp0
      automatically matched to 2AVY I:3-129
      complexed with mg, nmy, scm
      1. region i:3-129 [151152]
    13. 2avy
      Representative structure
      complexed with mg
      1. region i:3-129 [144850]
    14. 2aw7
      automatically matched to 2AVY I:3-129
      complexed with mg
      1. region i:3-129 [144893]
    15. 2qb9
      automatically matched to 2AVY I:3-129
      complexed with lll, mg
      1. region i:3-129 [150336]
    16. 2qbb
      automatically matched to 2AVY I:3-129
      complexed with lll, mg
      1. region i:3-129 [150389]
    17. 2i2p
      automatically matched to 2AVY I:3-129
      complexed with mg
      1. region i:3-129 [145428]
    18. 2i2u
      automatically matched to 2AVY I:3-129
      complexed with mg
      1. region i:3-129 [145470]
    19. 2qbh
      automatically matched to 2AVY I:3-129
      complexed with lll, mg
      1. region i:3-129 [150550]
    20. 2qbj
      automatically matched to 2AVY I:3-129
      complexed with lll, mg
      1. region i:3-129 [150604]
    21. 2qou
      automatically matched to 2AVY I:3-129
      complexed with mg, scm
      1. region i:3-129 [150993]
    22. 2qow
      automatically matched to 2AVY I:3-129
      complexed with mg, scm
      1. region i:3-129 [151046]
    23. 2z4m
      automatically matched to 2AVY I:3-129
      complexed with mg, par
      1. region i:3-129 [154114]
    24. 2vho
      automatically matched to 2AVY I:3-129
      complexed with mg
      1. region i:3-129 [153131]
    25. 2z4k
      automatically matched to 2AVY I:3-129
      complexed with mg, par
      1. region i:3-129 [154060]
    26. 2vhp
      automatically matched to 2AVY I:3-129
      complexed with mg
      1. region i:3-129 [153153]
RNase P protein [54220] (3)
1. RNase P protein [54221]
  1. Bacillus subtilis [TaxId: 1423] [54222] (1)
    1. 1a6f
      complexed with so4, zn; mutant
      1. chain a [37564]
  2. Staphylococcus aureus [TaxId: 1280] [54223] (1)
    1. 1d6t
      1. chain a [37565]
  3. Thermotoga maritima [TaxId: 2336] [89821] (1)
    1. 1nz0
      complexed with mse, so4; mutant
      1. chain a [86433]
      2. chain b [86434]
      3. chain c [86435]
      4. chain d [86436]
DNA gyrase/MutL, second domain [54224] (7)
1. DNA mismatch repair protein MutL [54225]
  1. Escherichia coli [TaxId: 562] [54226] (6)
    1. 1b63
      complexed with anp, edo, mg
      1. region a:217-331 [37566]
    2. 1nhi
      complexed with anp, edo, k, mg
      1. region a:217-331 [85718]
    3. 1b62
      complexed with adp, mg
      1. region a:217-332 [37567]
    4. 1nhj
      complexed with anp, mg, na; mutant
      1. region a:217-331 [85720]
    5. 1nhh
      complexed with anp, edo, mg, rb
      1. region a:217-331 [85716]
    6. 1bkn
      1. region a:217-331 [37568]
      2. region b:617-731 [37569]
2. DNA mismatch repair protein PMS2 [69656]
  1. Human (Homo sapiens) [TaxId: 9606] [69657] (3)
    1. 1h7s
      1. region a:232-365 [65705]
      2. region b:232-365 [65707]
    2. 1ea6
      complexed with adp, mg
      1. region a:232-364 [64871]
      2. region b:232-364 [64873]
    3. 1h7u
      complexed with atg, mg
      1. region a:232-364 [65709]
      2. region b:232-364 [65711]
3. DNA gyrase B [54227]
  1. Escherichia coli [TaxId: 562] [54228] (1)
    1. 1ei1
      complexed with anp, gol, so4; mutant
      1. region a:221-392 [37570]
      2. region b:621-792 [37571]
  2. Thermus thermophilus [TaxId: 274] [75352] (1)
    1. 1kij
      complexed with fmt, nov
      1. region a:221-392 [72514]
      2. region b:221-392 [72516]
4. DNA topoisomerase II [102751]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [102752] (2)
    1. 1pvg
      complexed with anp, mg
      1. region a:246-406 [95161]
      2. region b:246-405 [95163]
    2. 1qzr
      complexed with anp, cdx, mg
      1. region a:246-410 [96659]
      2. region b:246-405 [96661]
5. Topoisomerase IV subunit B [102753]
  1. Escherichia coli [TaxId: 562] [102754] (1)
    1. 1s16
      complexed with anp, mg, so4
      1. region a:1217-1383 [98331]
      2. region b:2217-2383 [98333]
6. Topoisomerase VI-B subunit [82577]
  contains an H2TH domain inserted in front of this domain and after the N-terminal ATPase domain
  1. Archaeon Sulfolobus shibatae [TaxId: 2286] [82578] (10)
    1. 2hkj
      automatically matched to d1mu5a2
      complexed with dms, mg, rdc
      1. region a:307-470 [136554]
    2. 1z5b
      automatically matched to d1mu5a2
      complexed with adp, alf, mg, so4
      1. region a:307-469 [124465]
    3. 1z5b
      automatically matched to d1mu5a2
      complexed with adp, alf, mg, so4
      1. region b:307-463 [124468]
    4. 1z59
      automatically matched to d1mu5a2
      complexed with adp, mg
      1. region a:307-470 [124456]
    5. 1mu5
      complexed with ca
      1. region a:307-470 [79473]
    6. 1z5c
      automatically matched to d1mu5a2
      complexed with adp, mg, po4
      1. region a:307-469 [124471]
    7. 1z5c
      automatically matched to d1mu5a2
      complexed with adp, mg, po4
      1. region b:307-463 [124474]
    8. 1z5a
      automatically matched to d1mu5a2
      complexed with adp, mg
      1. region a:307-469 [124459]
    9. 1z5a
      automatically matched to d1mu5a2
      complexed with adp, mg
      1. region b:307-463 [124462]
    10. 1mx0
      complexed with anp, mg, mse, na
      1. region a:307-467 [79619]
      2. region b:307-458 [79622]
      3. region c:307-469 [79625]
      4. region d:307-464 [79628]
      5. region e:307-461 [79631]
      6. region f:307-463 [79634]
Hsp90 middle domain [102755] (1)
related to the DNA gyrase/MutL family; contains extra C-terminal alpha/beta subdomain
1. Heat shock protein hsp82 [102756]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [102757] (3)
    1. 1usu
      complexed with Aha1
      complexed with gol
      1. chain a [99885]
    2. 1hk7
      complexed with cd, mg
      1. chain a [90626]
      2. chain b [90627]
    3. 1usv
      complexed with Aha1
      1. chain a [99887]
      2. chain c [99889]
      3. chain e [99891]
      4. chain g [99893]
Ribonuclease PH domain 1-like [54229] (14)
1. Ribonuclease PH, domain 1 [102758]
  1. Aquifex aeolicus [TaxId: 63363] [102759] (4)
    1. 1uds
      complexed with po4, so4; mutant
      1. region a:2-150 [99219]
    2. 1udq
      complexed with po4, so4; mutant
      1. region a:2-150 [99217]
    3. 1udo
      complexed with po4, so4; mutant
      1. region a:2-150 [99215]
    4. 1udn
      complexed with po4, so4
      1. region a:2-150 [99213]
  2. Pseudomonas aeruginosa [TaxId: 287] [102760] (2)
    1. 1r6l
      complexed with nhe, so4
      1. region a:1-151 [97153]
    2. 1r6m
      complexed with po4
      1. region a:1-151 [97155]
  3. Bacillus subtilis [TaxId: 1423] [102761] (3)
    1. 1oys
      mutant
      1. region a:1-151 [93758]
    2. 1oyp
      complexed with sul
      1. region a:1-151 [93734]
      2. region b:1-151 [93736]
      3. region c:1-151 [93738]
      4. region d:1-151 [93740]
      5. region e:1-151 [93742]
      6. region f:1-151 [93744]
    3. 1oyr
      complexed with cd, sul
      1. region a:1-151 [93746]
      2. region b:1-151 [93748]
      3. region c:1-151 [93750]
      4. region d:1-151 [93752]
      5. region e:1-151 [93754]
      6. region f:1-151 [93756]
2. Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4 [54230]
  duplication of two-domain units formed by domains 1-2 and 4-5
  1. Streptomyces antibioticus [TaxId: 1890] [54231] (2)
    1. 1e3h
      complexed with so4
      1. region a:3-151 [37572]
      2. region a:346-482 [37573]
    2. 1e3p
      complexed with so4, wo4
      1. region a:3-151 [37574]
      2. region a:346-482 [37575]
3. Exosome complex exonuclease RRP42 [159908]
  1. Human (Homo sapiens) [TaxId: 9606] [159909] (1)
    SQ Q15024 5-191
    1. 2nn6
      mutant
      1. region e:5-191 [148303]
4. Exosome complex exonuclease RRP46 [159910]
  1. Human (Homo sapiens) [TaxId: 9606] [159911] (1)
    SQ Q9NQT4 25-146
    1. 2nn6
      mutant
      1. region d:25-146 [148301]
5. Exosome complex exonuclease RRP45 [159912]
  1. Human (Homo sapiens) [TaxId: 9606] [159913] (1)
    SQ Q86Y41 1-184
    1. 2nn6
      mutant
      1. region a:1-184 [148295]
6. Exosome complex exonuclease RRP43 [159914]
  1. Human (Homo sapiens) [TaxId: 9606] [159915] (1)
    SQ Q96B26 7-187
    1. 2nn6
      mutant
      1. region c:7-187 [148299]
7. Exosome complex exonuclease MTR3 [159916]
  1. Human (Homo sapiens) [TaxId: 9606] [159917] (1)
    SQ Q5RKV6 29-175
    1. 2nn6
      mutant
      1. region f:29-175 [148305]
8. Exosome complex exonuclease RRP41 [159918]
  1. Human (Homo sapiens) [TaxId: 9606] [159919] (1)
    SQ Q9NPD3 7-151
    1. 2nn6
      mutant
      1. region b:6-150 [148297]
9. Exosome complex exonuclease 2,ECX2 [159920]
  1. Archaeoglobus fulgidus [TaxId: 2234] [159921] (6)
    SQ O29756 3-178
    1. 2ba0
      1. region g:3-178 [146111]
    2. 2ba0
      automatically matched to 2BA0 G:3-178
      1. region h:3-178 [146113]
    3. 2ba0
      automatically matched to 2BA0 G:3-178
      1. region i:3-178 [146115]
    4. 2ba1
      automatically matched to 2BA0 G:3-178
      complexed with zn
      1. region g:3-178 [146123]
    5. 2ba1
      automatically matched to 2BA0 G:3-178
      complexed with zn
      1. region h:3-178 [146125]
    6. 2ba1
      automatically matched to 2BA0 G:3-178
      complexed with zn
      1. region i:3-178 [146127]
  2. Sulfolobus solfataricus [TaxId: 2287] [159922] (51)
    SQ Q9UXC0 1-191
    1. 2je6
      complexed with 1pe, cl, peg; mutant
      1. region a:1-191 [147991]
    2. 2jea
      automatically matched to 2JE6 A:1-191
      complexed with 1pe; mutant
      1. region a:1-191 [148008]
    3. 2jeb
      automatically matched to 2JE6 A:1-191
      complexed with 1pe, cl, mn; mutant
      1. region a:1-191 [148015]
    4. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region a:1-191 [146165]
    5. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region c:1-191 [146169]
    6. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region e:1-191 [146173]
    7. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region g:1-191 [146177]
    8. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region i:1-191 [146181]
    9. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region k:1-191 [146185]
    10. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region m:1-191 [146189]
    11. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region o:1-191 [146193]
    12. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region q:1-191 [146197]
    13. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region s:1-191 [146201]
    14. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region u:1-191 [146205]
    15. 2br2
      automatically matched to 2JE6 A:1-191
      complexed with cl
      1. region w:1-191 [146209]
    16. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region a:1-191 [146228]
    17. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region c:1-191 [146232]
    18. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region e:1-191 [146236]
    19. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region g:1-191 [146240]
    20. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region i:1-191 [146244]
    21. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region k:1-191 [146248]
    22. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region m:1-191 [146252]
    23. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region o:1-191 [146256]
    24. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region q:1-191 [146260]
    25. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region s:1-191 [146264]
    26. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region u:1-191 [146268]
    27. 2c37
      automatically matched to 2JE6 A:1-191
      complexed with cl, na, rp5, u5p
      1. region w:1-191 [146272]
    28. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region a:1-191 [146276]
    29. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region c:1-191 [146280]
    30. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region e:1-191 [146284]
    31. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region g:1-191 [146288]
    32. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region i:1-191 [146292]
    33. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region k:1-191 [146296]
    34. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region m:1-191 [146300]
    35. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region o:1-191 [146304]
    36. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region q:1-191 [146308]
    37. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region s:1-191 [146312]
    38. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region u:1-191 [146316]
    39. 2c38
      automatically matched to 2JE6 A:1-191
      complexed with amp, cl
      1. region w:1-191 [146320]
    40. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region a:1-191 [146324]
    41. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region c:1-191 [146328]
    42. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region e:1-191 [146332]
    43. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region g:1-191 [146336]
    44. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region i:1-191 [146338]
    45. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region k:1-191 [146342]
    46. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region m:1-191 [146346]
    47. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region o:1-191 [146350]
    48. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region q:1-191 [146354]
    49. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region s:1-191 [146358]
    50. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region u:1-191 [146362]
    51. 2c39
      automatically matched to 2JE6 A:1-191
      complexed with adp
      1. region w:1-191 [146366]
10. Exosome complex exonuclease 1, ECX1 [159923]
  1. Sulfolobus solfataricus [TaxId: 2287] [159924] (50)
    SQ Q9UXC2 8-155
    1. 2je6
      complexed with 1pe, cl, peg; mutant
      1. region b:8-155 [147993]
    2. 2jea
      automatically matched to 2JE6 B:8-155
      complexed with 1pe; mutant
      1. region b:8-155 [148010]
    3. 2jeb
      automatically matched to 2JE6 B:8-155
      complexed with 1pe, cl, mn; mutant
      1. region b:9-155 [148017]
    4. 2br2
      complexed with cl
      1. region b:8-155 [146167]
    5. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region d:8-155 [146171]
    6. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region f:8-155 [146175]
    7. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region h:8-155 [146179]
    8. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region j:8-155 [146183]
    9. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region l:8-155 [146187]
    10. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region n:8-155 [146191]
    11. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region p:8-155 [146195]
    12. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region r:8-155 [146199]
    13. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region t:8-155 [146203]
    14. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region v:8-155 [146207]
    15. 2br2
      automatically matched to 2BR2 B:8-155
      complexed with cl
      1. region x:8-155 [146211]
    16. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region b:8-155 [146230]
    17. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region d:8-155 [146234]
    18. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region f:8-155 [146238]
    19. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region h:8-155 [146242]
    20. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region j:8-155 [146246]
    21. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region l:8-155 [146250]
    22. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region n:8-155 [146254]
    23. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region p:8-155 [146258]
    24. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region r:8-155 [146262]
    25. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region t:8-155 [146266]
    26. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region v:8-155 [146270]
    27. 2c37
      automatically matched to 2BR2 B:8-155
      complexed with cl, na, rp5, u5p
      1. region x:8-155 [146274]
    28. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region b:8-155 [146278]
    29. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region d:8-155 [146282]
    30. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region f:8-155 [146286]
    31. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region h:8-155 [146290]
    32. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region j:8-155 [146294]
    33. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region l:8-155 [146298]
    34. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region n:8-155 [146302]
    35. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region p:8-155 [146306]
    36. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region r:8-155 [146310]
    37. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region t:8-155 [146314]
    38. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region v:9-155 [146318]
    39. 2c38
      automatically matched to 2BR2 B:8-155
      complexed with amp, cl
      1. region x:8-155 [146322]
    40. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region b:8-155 [146326]
    41. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region d:8-155 [146330]
    42. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region f:8-155 [146334]
    43. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region j:8-155 [146340]
    44. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region l:8-155 [146344]
    45. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region n:10-155 [146348]
    46. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region p:8-155 [146352]
    47. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region r:8-155 [146356]
    48. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region t:8-155 [146360]
    49. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region v:9-155 [146364]
    50. 2c39
      automatically matched to 2BR2 B:8-155
      complexed with adp
      1. region x:8-155 [146368]
  2. Archaeoglobus fulgidus [TaxId: 2234] [159925] (6)
    SQ O29757 10-153
    1. 2ba0
      1. region d:10-153 [146105]
    2. 2ba0
      automatically matched to 2BA0 D:10-153
      1. region e:10-153 [146107]
    3. 2ba0
      automatically matched to 2BA0 D:10-153
      1. region f:10-153 [146109]
    4. 2ba1
      automatically matched to 2BA0 D:10-153
      complexed with zn
      1. region d:10-153 [146117]
    5. 2ba1
      automatically matched to 2BA0 D:10-153
      complexed with zn
      1. region e:10-153 [146119]
    6. 2ba1
      automatically matched to 2BA0 D:10-153
      complexed with zn
      1. region f:10-153 [146121]
GHMP Kinase, N-terminal domain [54232] (10)
1. Galactokinase [102762]
  1. Lactococcus lactis [TaxId: 1358] [102763] (1)
    1. 1pie
      complexed with gal, po4
      1. region a:9-213 [94706]
  2. Archaeon Pyrococcus furiosus [TaxId: 2261] [102764] (1)
    1. 1s4e
      complexed with adp, gla, mg
      1. region a:5-180 [98477]
      2. region b:8-180 [98479]
      3. region c:4-180 [98481]
      4. region d:2-180 [98483]
      5. region e:3-180 [98485]
      6. region f:2-180 [98487]
      7. region g:11-179 [98489]
      8. region h:2-180 [98491]
      9. region i:2-180 [98493]
  3. Human (Homo sapiens) [TaxId: 9606] [117793] (1)
    SQ P51570
    1. 1wuu
      complexed with anp, gal, mg
      1. region a:2-216 [114900]
      2. region b:2-216 [114902]
      3. region c:2-216 [114904]
      4. region d:2-216 [114906]
2. Homoserine kinase [54233]
  1. Archaeon Methanococcus jannaschii [TaxId: 2190] [54234] (5)
    1. 1h72
      complexed with anp, hse, trs
      1. region c:5-167 [60712]
    2. 1h73
      complexed with anp, thr
      1. region a:5-167 [60714]
    3. 1h74
      complexed with adp, ile, mg, sap
      1. region a:5-167 [65691]
      2. region b:5-167 [65693]
      3. region c:5-167 [65695]
      4. region d:5-167 [65697]
    4. 1fwk
      CASP4
      complexed with adp, mg
      1. region a:5-167 [37576]
      2. region b:5-167 [37577]
      3. region c:5-167 [37578]
      4. region d:5-167 [37579]
    5. 1fwl
      1. region a:5-167 [37580]
      2. region b:5-167 [37581]
      3. region c:5-167 [37582]
      4. region d:5-167 [37583]
3. Mevalonate kinase [75353]
  1. Archaeon Methanococcus jannaschii [TaxId: 2190] [75354] (2)
    1. 1kkh
      complexed with dio
      1. region a:1-180 [72645]
    2. 1vis
      structural genomics
      complexed with dox
      1. region a:0-180 [100769]
  2. Rat (Rattus norvegicus) [TaxId: 10116] [75355] (2)
    1. 1kvk
      complexed with atp, mg
      1. region a:1-225 [73060]
    2. 2r42
      automatically matched to d1kvka1
      complexed with fps, mg
      1. region a:1-225 [151573]
4. Phosphomevalonate kinase (PMK) [75356]
  1. Streptococcus pneumoniae r6 [TaxId: 171101] [75357] (1)
    1. 1k47
      complexed with mse
      1. region a:1-194 [72040]
      2. region b:1-194 [72042]
      3. region c:1-194 [72044]
      4. region d:1-194 [72046]
      5. region e:1-194 [72048]
      6. region f:1-194 [72050]
5. Mevalonate 5-diphosphate decarboxylase [64219]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64220] (1)
    1. 1fi4
      mutant
      1. region a:3-190 [59847]
6. 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE [89822]
  1. Thermus thermophilus [TaxId: 274] [89823] (1)
    1. 1uek
      1. region a:1-148 [88483]
  2. Escherichia coli [TaxId: 562] [102765] (1)
    1. 1oj4
      complexed with anp, cdm, cl
      1. region a:1-163 [93083]
      2. region b:1-163 [93085]
Early switch protein XOL-1, N-terminal domain [89824] (1)
diverged from the GHMP Kinase family; lost the ATP-binding site
1. Early switch protein XOL-1, N-terminal domain [89825]
  1. Nematode (Caenorhabditis elegans) [TaxId: 6239] [89826] (1)
    1. 1mg7
      1. region a:14-187 [84954]
      2. region b:14-187 [84956]
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89827] (1)
duplication; there are two structural repeats of this fold; each repeat is elaborated with additional structures forming the active site
1. UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89828]
  1. Aquifex aeolicus [TaxId: 63363] [89829] (34)
    SQ O67648 3-270
    1. 1p42
      complexed with myr, zn; mutant
      1. region a:2-127 [87754]
      2. region a:128-280 [87755]
      3. region b:2-127 [87756]
      4. region b:128-280 [87757]
    2. 2go3
      automatically matched to d1xxea1
      complexed with cl, gol, imd, myr, plm, zn; mutant
      1. region a:3-133 [135422]
    3. 2go3
      automatically matched to d1xxea2
      complexed with cl, gol, imd, myr, plm, zn; mutant
      1. region a:134-279 [135423]
    4. 2go3
      automatically matched to d1xxea1
      complexed with cl, gol, imd, myr, plm, zn; mutant
      1. region b:3-133 [135424]
    5. 2go3
      automatically matched to d1xxea2
      complexed with cl, gol, imd, myr, plm, zn; mutant
      1. region b:134-279 [135425]
    6. 1yhc
      automatically matched to d1xxea1
      complexed with cac, cl, gol, pam, so4, zn; mutant
      1. region a:3-133 [123168]
    7. 1yhc
      automatically matched to d1xxea2
      complexed with cac, cl, gol, pam, so4, zn; mutant
      1. region a:134-279 [123169]
    8. 1yhc
      automatically matched to d1xxea1
      complexed with cac, cl, gol, pam, so4, zn; mutant
      1. region b:3-133 [123170]
    9. 1yhc
      automatically matched to d1xxea2
      complexed with cac, cl, gol, pam, so4, zn; mutant
      1. region b:134-279 [123171]
    10. 2j65
      automatically matched to d1xxea1
      complexed with cl, myr, udp, zn; mutant
      1. region a:3-127 [138074]
    11. 2j65
      automatically matched to d1xxea2
      complexed with cl, myr, udp, zn; mutant
      1. region a:128-268 [138075]
    12. 2j65
      automatically matched to d1xxea1
      complexed with cl, myr, udp, zn; mutant
      1. region b:3-127 [138076]
    13. 2j65
      automatically matched to d1xxea2
      complexed with cl, myr, udp, zn; mutant
      1. region b:128-268 [138077]
    14. 2o3z
      automatically matched to d1xxea1
      complexed with ai7, cl, so4, zn; mutant
      1. region a:3-133 [138903]
    15. 2o3z
      automatically matched to d1xxea2
      complexed with ai7, cl, so4, zn; mutant
      1. region a:134-280 [138904]
    16. 2o3z
      automatically matched to d1xxea1
      complexed with ai7, cl, so4, zn; mutant
      1. region b:3-133 [138905]
    17. 2o3z
      automatically matched to d1xxea2
      complexed with ai7, cl, so4, zn; mutant
      1. region b:134-280 [138906]
    18. 1yh8
      automatically matched to d1xxea1
      complexed with cl, pam, zn; mutant
      1. region b:3-133 [123162]
    19. 1yh8
      automatically matched to d1xxea2
      complexed with cl, pam, zn; mutant
      1. region b:134-279 [123163]
    20. 2ier
      automatically matched to d1xxea1
      complexed with gol, plm, udp, zn; mutant
      1. region a:3-133 [137319]
    21. 2ier
      automatically matched to d1xxea2
      complexed with gol, plm, udp, zn; mutant
      1. region a:134-280 [137320]
    22. 2ier
      automatically matched to d1xxea1
      complexed with gol, plm, udp, zn; mutant
      1. region b:3-133 [137321]
    23. 2ier
      automatically matched to d1xxea2
      complexed with gol, plm, udp, zn; mutant
      1. region b:134-280 [137322]
    24. 2go4
      automatically matched to d1xxea1
      complexed with cl, tux, zn; mutant
      1. region a:3-133 [135426]
    25. 2go4
      automatically matched to d1xxea2
      complexed with cl, tux, zn; mutant
      1. region a:134-279 [135427]
    26. 2go4
      automatically matched to d1xxea1
      complexed with cl, tux, zn; mutant
      1. region b:3-133 [135428]
    27. 2go4
      automatically matched to d1xxea2
      complexed with cl, tux, zn; mutant
      1. region b:134-279 [135429]
    28. 2ies
      automatically matched to d1xxea1
      complexed with cl, plm, pop, zn; mutant
      1. region a:3-133 [137323]
    29. 2ies
      automatically matched to d1xxea2
      complexed with cl, plm, pop, zn; mutant
      1. region a:134-280 [137324]
    30. 2ies
      automatically matched to d1xxea1
      complexed with cl, plm, pop, zn; mutant
      1. region b:3-133 [137325]
    31. 2ies
      automatically matched to d1xxea2
      complexed with cl, plm, pop, zn; mutant
      1. region b:134-280 [137326]
    32. 2jt2
      automatically matched to d1xxea1
      complexed with c90, zn; mutant
      1. region a:3-127 [148195]
    33. 2jt2
      automatically matched to d1xxea2
      complexed with c90, zn; mutant
      1. region a:128-269 [148196]
    34. 1xxe
      complexed with tux, zn
      1. region a:3-127 [116157]
      2. region a:128-270 [116158]
Imidazole glycerol phosphate dehydratase [102766] (3)
duplication; there are two structural repeats of this fold
1. Imidazole glycerol phosphate dehydratase [102767]
  1. Fungus (Filobasidiella neoformans) [TaxId: 5207] [102768] (1)
    1. 1rhy
      complexed with acy, emc, gol, hg, so4
      1. region a:2-93 [97491]
      2. region a:94-187 [97492]
      3. region b:2-93 [97493]
      4. region b:94-188 [97494]
  2. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [142926] (32)
    SQ P34047 159-255! SQ P34047 73-158
    1. 2f1d
      complexed with mn, so4
      1. region a:10-95 [132728]
    2. 2f1d
      complexed with mn, so4
      1. region a:96-192 [132729]
    3. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region b:10-95 [132730]
    4. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region b:96-192 [132731]
    5. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region c:10-95 [132732]
    6. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region c:96-192 [132733]
    7. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region d:10-95 [132734]
    8. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region d:96-192 [132735]
    9. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region e:10-95 [132736]
    10. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region e:96-192 [132737]
    11. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region f:10-95 [132738]
    12. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region f:96-192 [132739]
    13. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region g:10-95 [132740]
    14. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region g:96-192 [132741]
    15. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region h:10-95 [132742]
    16. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region h:96-192 [132743]
    17. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region i:10-95 [132744]
    18. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region i:96-192 [132745]
    19. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region j:10-95 [132746]
    20. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region j:96-192 [132747]
    21. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region k:10-95 [132748]
    22. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region k:96-192 [132749]
    23. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region l:10-95 [132750]
    24. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region l:96-192 [132751]
    25. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region m:10-95 [132752]
    26. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region m:96-192 [132753]
    27. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region n:10-95 [132754]
    28. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region n:96-192 [132755]
    29. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region o:10-95 [132756]
    30. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region o:96-192 [132757]
    31. 2f1d
      automatically matched to 2F1D A:10-95
      complexed with mn, so4
      1. region p:10-95 [132758]
    32. 2f1d
      automatically matched to 2F1D A:96-192
      complexed with mn, so4
      1. region p:96-192 [132759]
  3. Staphylococcus aureus [TaxId: 1280] [142927] (12)
    SQ P64373 1-84! SQ P64373 85-179
    1. 2ae8
      complexed with mg
      1. region a:1-84 [126604]
    2. 2ae8
      complexed with mg
      1. region a:85-179 [126605]
    3. 2ae8
      automatically matched to 2AE8 A:1-84
      complexed with mg
      1. region b:1-84 [126606]
    4. 2ae8
      automatically matched to 2AE8 A:85-179
      complexed with mg
      1. region b:85-179 [126607]
    5. 2ae8
      automatically matched to 2AE8 A:1-84
      complexed with mg
      1. region c:1-84 [126608]
    6. 2ae8
      automatically matched to 2AE8 A:85-179
      complexed with mg
      1. region c:85-179 [126609]
    7. 2ae8
      automatically matched to 2AE8 A:1-84
      complexed with mg
      1. region d:1-84 [126610]
    8. 2ae8
      automatically matched to 2AE8 A:85-179
      complexed with mg
      1. region d:85-179 [126611]
    9. 2ae8
      automatically matched to 2AE8 A:1-84
      complexed with mg
      1. region e:1-84 [126612]
    10. 2ae8
      automatically matched to 2AE8 A:85-179
      complexed with mg
      1. region e:85-179 [126613]
    11. 2ae8
      automatically matched to 2AE8 A:1-84
      complexed with mg
      1. region f:1-84 [126614]
    12. 2ae8
      automatically matched to 2AE8 A:85-179
      complexed with mg
      1. region f:85-179 [126615]
ATP-dependent protease Lon (La), catalytic domain [102769] (2)
contains extra C-terminal alpha/beta subdomain
1. ATP-dependent protease Lon (La), catalytic domain [102770]
  1. Escherichia coli [TaxId: 562] [102771] (2)
    1. 1rre
      complexed with so4; mutant
      1. chain a [97791]
      2. chain b [97792]
      3. chain c [97793]
      4. chain d [97794]
      5. chain e [97795]
      6. chain f [97796]
    2. 1rr9
      complexed with so4; mutant
      1. chain a [97783]
      2. chain b [97784]
      3. chain c [97785]
      4. chain d [97786]
      5. chain e [97787]
      6. chain f [97788]
  2. Methanococcus jannaschii [TaxId: 2190] [117794] (1)
    SQ Q58812 456-640 # MJ1417
    1. 1xhk
      complexed with mes, so4
      1. chain a [115299]
      2. chain b [115300]
YigZ N-terminal domain-like [102772] (2)
modification of the common fold; contains extra alpha-beta unit after strand 2, the extra strand is inserted between strands 3 and 4
1. Hypothetical protein YigZ, N-terminal domain [102773]
  1. Escherichia coli [TaxId: 562] [102774] (1)
    two-domain structure is similar to the C-terminal region of EF-G (domains IV and V)
    1. 1vi7
      structural genomics
      1. region a:3-137 [100740]
2. Hypothetical protein TTHA1053, N-terminal domain [142928]
  1. Thermus thermophilus [TaxId: 274] [142929] (1)
    SQ Q5SJF5 2-124
    1. 2cve
      complexed with tla
      1. region a:2-124 [130869]
Formaldehyde-activating enzyme, FAE [117795] (1)
modification of the common fold; contains extra alpha-beta unit after strand 2, the extra strand extends beta-sheet antiparallel to strand 3
1. Formaldehyde-activating enzyme, FAE [117796]
  1. Methylobacterium extorquens [TaxId: 408] [117797] (2)
    SQ Q9FA38
    1. 1y60
      complexed with h4m
      1. chain a [116489]
      2. chain b [116490]
      3. chain c [116491]
      4. chain d [116492]
      5. chain e [116493]
    2. 1y5y
      complexed with ca, na
      1. chain a [116484]
      2. chain b [116485]
      3. chain c [116486]
      4. chain d [116487]
      5. chain e [116488]