Structural Classification of Proteins
Superfamily: Ribosomal protein L6
uperfamily
Lineage:
Root:
scop
Class:
Alpha and beta proteins (a+b)
[53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold:
Ribosomal protein L6
[56052]
consists of two beta-sheets and one alpha-helix packed around single core
Superfamily:
Ribosomal protein L6
[56053]
uperfamily
Families:
Ribosomal protein L6
[56054] (6)
Ribosomal protein L6 [56055]
duplication: consists of two domains of this fold
Bacillus stearothermophilus
[TaxId: 1422]
[56056] (9)
1rl6
region a:7-81
[41473]
region a:82-170
[41474]
1yl3
automatically matched to d1rl6a1
region h:7-81
[123578]
1yl3
automatically matched to d1rl6a2
region h:82-170
[123579]
2b66
automatically matched to d1rl6a1
region h:7-81
[127957]
2b66
automatically matched to d1rl6a2
region h:82-170
[127958]
2b9n
automatically matched to d1rl6a1
region h:7-81
[128149]
2b9n
automatically matched to d1rl6a2
region h:82-170
[128150]
2b9p
automatically matched to d1rl6a1
region h:7-81
[128186]
2b9p
automatically matched to d1rl6a2
region h:82-170
[128187]
Archaeon Haloarcula marismortui
[TaxId: 2238]
[56057] (61)
SQ
P14135
1vqo
automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
region e:1-79
[120366]
1vqo
automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
region e:80-172
[120367]
1vq8
automatically matched to d1ffk11
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region e:1-79
[120192]
1vq8
automatically matched to d1ffk12
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region e:80-172
[120193]
1vqp
automatically matched to d1ffk11
complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region e:1-79
[120395]
1vqp
automatically matched to d1ffk12
complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region e:80-172
[120396]
1jj2
complexed with cd, cl, k, mg, na
region e:1-79
[63089]
region e:80-172
[63090]
1yhq
automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
region e:1-79
[123187]
1yhq
automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
region e:80-172
[123188]
1vql
automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
region e:1-79
[120279]
1vql
automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
region e:80-172
[120280]
1vqk
automatically matched to d1ffk11
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
region e:1-79
[120250]
1vqk
automatically matched to d1ffk12
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
region e:80-172
[120251]
1s72
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
region e:1-79
[105323]
region e:80-172
[105324]
1vqm
automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region e:1-79
[120308]
1vqm
automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region e:80-172
[120309]
1vqn
automatically matched to d1ffk11
complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
region e:1-79
[120337]
1vqn
automatically matched to d1ffk12
complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
region e:80-172
[120338]
1yi2
automatically matched to d1ffk11
complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
region e:1-79
[123234]
1yi2
automatically matched to d1ffk12
complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
region e:80-172
[123235]
1yij
automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
region e:1-79
[123302]
1yij
automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
region e:80-172
[123303]
1vq7
automatically matched to d1ffk11
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
region e:1-79
[120163]
1vq7
automatically matched to d1ffk12
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
region e:80-172
[120164]
1vq4
automatically matched to d1ffk11
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
region e:1-79
[120076]
1vq4
automatically matched to d1ffk12
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
region e:80-172
[120077]
2otl
automatically matched to d1ffk11
complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
region e:1-79
[139350]
2otl
automatically matched to d1ffk12
complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
region e:80-172
[139351]
1vq5
automatically matched to d1ffk11
complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
region e:1-79
[120105]
1vq5
automatically matched to d1ffk12
complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
region e:80-172
[120106]
1vq9
automatically matched to d1ffk11
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region e:1-79
[120221]
1vq9
automatically matched to d1ffk12
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region e:80-172
[120222]
1m90
complexed with aca, cd, cl, k, mg, na, pha, sps
region g:1-79
[78844]
region g:80-172
[78845]
1yit
automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
region e:1-79
[123345]
1yit
automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
region e:80-172
[123346]
1vq6
automatically matched to d1ffk11
complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
region e:1-79
[120134]
1vq6
automatically matched to d1ffk12
complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
region e:80-172
[120135]
2otj
automatically matched to d1ffk11
complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
region e:1-79
[139321]
2otj
automatically matched to d1ffk12
complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
region e:80-172
[139322]
1yjw
automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
region e:1-79
[123469]
1yjw
automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
region e:80-172
[123470]
1nji
complexed with cd, cl, clm, k, mg, na; mutant
region g:1-79
[85797]
region g:80-172
[85798]
1kqs
complexed with aca, btn, cd, cl, k, mg, na, pha, ppu
region e:1-79
[68819]
region e:80-172
[68820]
1kc8
complexed with bls, cd, cl, k, mg, na
region g:1-79
[84361]
region g:80-172
[84362]
1yjn
automatically matched to d1ffk11
complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
region e:1-79
[123437]
1yjn
automatically matched to d1ffk12
complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
region e:80-172
[123438]
1n8r
complexed with cd, cl, k, mg, na, vir; mutant
region g:1-79
[85433]
region g:80-172
[85434]
1k73
complexed with anm, cd, cl, k, mg, na
region g:1-79
[84322]
region g:80-172
[84323]
1yj9
automatically matched to d1ffk11
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
region e:1-79
[123398]
1yj9
automatically matched to d1ffk12
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
region e:80-172
[123399]
1qvg
complexed with cd, cl, k, mg, na
region e:1-79
[96396]
region e:80-172
[96397]
1q82
complexed with cd, cl, k, mg, na, ppu
region g:1-79
[96133]
region g:80-172
[96134]
1qvf
complexed with cd, cl, k, mg, na
region e:1-79
[96366]
region e:80-172
[96367]
1q81
complexed with cd, cl, k, mg, na, ppu
region g:1-79
[96103]
region g:80-172
[96104]
1k9m
complexed with cd, cl, k, mg, na, tyk
region g:1-79
[72217]
region g:80-172
[72218]
1kd1
complexed with cd, cl, k, mg, na, spr
region g:1-79
[72328]
region g:80-172
[72329]
1k8a
complexed with cai, cd, cl, k, mg, na
region g:1-79
[72150]
region g:80-172
[72151]
1m1k
complexed with cd, cl, k, mg, na, zit
region g:1-79
[74388]
region g:80-172
[74389]
1q86
complexed with cd, cl, k, mg, na, pha
region g:1-79
[96171]
region g:80-172
[96172]
1q7y
complexed with cd, cl, k, mg, na, po4, puy
region g:1-79
[96069]
region g:80-172
[96070]
1ffk
CA-atoms only
complexed with cd, k, mo3; mutant
region 1:1-79
[41475]
region 1:80-172
[41476]
Human (Homo sapiens)
[TaxId: 9606]
[160795] (1)
SQ
P32969
1-87
2cql
N-terminal domain only
region a:1-87
[146421]
Escherichia coli
[TaxId: 562]
[160796] (54)
SQ
P02390
1-81! SQ
P02390
82-176
2qam
automatically matched to 2AW4 G:1-81
complexed with mg, nmy, zn
region g:1-81
[150244]
2qam
automatically matched to 2AW4 G:82-176
complexed with mg, nmy, zn
region g:82-176
[150245]
2qao
automatically matched to 2AW4 G:1-81
complexed with mg, nmy, zn
region g:1-81
[150297]
2qao
automatically matched to 2AW4 G:82-176
complexed with mg, nmy, zn
region g:82-176
[150298]
2i2t
automatically matched to 2AW4 G:1-81
complexed with mg, zn
region g:1-81
[145446]
2i2t
automatically matched to 2AW4 G:82-176
complexed with mg, zn
region g:82-176
[145447]
2i2v
automatically matched to 2AW4 G:1-81
complexed with mg, zn
region g:1-81
[145488]
2i2v
automatically matched to 2AW4 G:82-176
complexed with mg, zn
region g:82-176
[145489]
2qbe
automatically matched to 2AW4 G:1-81
complexed with mg, zn
region g:1-81
[150464]
2qbe
automatically matched to 2AW4 G:82-176
complexed with mg, zn
region g:82-176
[150465]
2qbg
automatically matched to 2AW4 G:1-81
complexed with mg, zn
region g:1-81
[150518]
2qbg
automatically matched to 2AW4 G:82-176
complexed with mg, zn
region g:82-176
[150519]
2qoz
automatically matched to 2AW4 G:1-81
complexed with mg, nmy, zn
region g:1-81
[151120]
2qoz
automatically matched to 2AW4 G:82-176
complexed with mg, nmy, zn
region g:82-176
[151121]
2qp1
automatically matched to 2AW4 G:1-81
complexed with mg, nmy, zn
region g:1-81
[151173]
2qp1
automatically matched to 2AW4 G:82-176
complexed with mg, nmy, zn
region g:82-176
[151174]
3df2
automatically matched to 2AW4 G:1-81
complexed with mg, zn
region g:1-81
[157633]
3df2
automatically matched to 2AW4 G:82-176
complexed with mg, zn
region g:82-176
[157634]
3df4
automatically matched to 2AW4 G:1-81
complexed with mg, zn
region g:1-81
[157687]
3df4
automatically matched to 2AW4 G:82-176
complexed with mg, zn
region g:82-176
[157688]
2qba
automatically matched to 2AW4 G:1-81
complexed with lll, mg, zn
region g:1-81
[150357]
2qba
automatically matched to 2AW4 G:82-176
complexed with lll, mg, zn
region g:82-176
[150358]
2qbc
automatically matched to 2AW4 G:1-81
complexed with lll, mg, zn
region g:1-81
[150410]
2qbc
automatically matched to 2AW4 G:82-176
complexed with lll, mg, zn
region g:82-176
[150411]
2qbi
automatically matched to 2AW4 G:1-81
complexed with lll, mg, zn
region g:1-81
[150572]
2qbi
automatically matched to 2AW4 G:82-176
complexed with lll, mg, zn
region g:82-176
[150573]
2qbk
automatically matched to 2AW4 G:1-81
complexed with lll, mg, zn
region g:1-81
[150626]
2qbk
automatically matched to 2AW4 G:82-176
complexed with lll, mg, zn
region g:82-176
[150627]
2qov
automatically matched to 2AW4 G:1-81
complexed with mg, zn
region g:1-81
[151014]
2qov
automatically matched to 2AW4 G:82-176
complexed with mg, zn
region g:82-176
[151015]
2qox
automatically matched to 2AW4 G:1-81
complexed with mg, zn
region g:1-81
[151067]
2qox
automatically matched to 2AW4 G:82-176
complexed with mg, zn
region g:82-176
[151068]
1vs6
automatically matched to 2AW4 G:1-81
complexed with mg
region g:1-81
[144461]
1vs6
automatically matched to 2AW4 G:82-176
complexed with mg
region g:82-176
[144462]
1vs8
automatically matched to 2AW4 G:1-81
complexed with mg
region g:1-81
[144502]
1vs8
automatically matched to 2AW4 G:82-176
complexed with mg
region g:82-176
[144503]
2aw4
Representative structure
complexed with mg
region g:1-81
[144870]
2aw4
Representative structure
complexed with mg
region g:82-176
[144871]
2awb
automatically matched to 2AW4 G:1-81
complexed with mg
region g:1-81
[144911]
2awb
automatically matched to 2AW4 G:82-176
complexed with mg
region g:82-176
[144912]
2z4l
automatically matched to 2AW4 G:1-81
complexed with mg, par, zn
region g:1-81
[154082]
2z4l
automatically matched to 2AW4 G:82-176
complexed with mg, par, zn
region g:82-176
[154083]
2z4n
automatically matched to 2AW4 G:1-81
complexed with mg, par, zn
region g:1-81
[154136]
2z4n
automatically matched to 2AW4 G:82-176
complexed with mg, par, zn
region g:82-176
[154137]
2vhm
automatically matched to 2AW4 G:1-81
complexed with mg; mutant
region g:1-81
[153067]
2vhm
automatically matched to 2AW4 G:82-176
complexed with mg; mutant
region g:82-176
[153068]
2vhn
automatically matched to 2AW4 G:1-81
complexed with mg
region g:1-81
[153099]
2vhn
automatically matched to 2AW4 G:82-176
complexed with mg
region g:82-176
[153100]
2rdo
automatically matched to 2AW4 G:1-81
region g:1-81
[151944]
2rdo
automatically matched to 2AW4 G:82-176
region g:82-176
[151945]
2j28
automatically matched to 2AW4 G:1-81
complexed with mg
region g:1-81
[145627]
2j28
automatically matched to 2AW4 G:82-176
complexed with mg
region g:82-176
[145628]
3bbx
automatically matched to 2AW4 G:1-81
complexed with mg
region g:1-81
[155103]
3bbx
automatically matched to 2AW4 G:82-176
complexed with mg
region g:82-176
[155104]
Thermus thermophilus
[TaxId: 274]
[160797] (22)
SQ
Q72I19
11-81! SQ
Q72I19
82-170
2j01
Representative structure
region h:12-82
[145569]
2j01
Representative structure
region h:83-171
[145570]
2j03
automatically matched to 2J01 H:12-82
complexed with lys
region h:12-82
[145596]
2j03
automatically matched to 2J01 H:83-171
complexed with lys
region h:83-171
[145597]
3d5b
automatically matched to 2J01 H:12-82
complexed with mg
region h:12-82
[157358]
3d5b
automatically matched to 2J01 H:83-171
complexed with mg
region h:83-170
[157359]
3d5d
automatically matched to 2J01 H:12-82
complexed with mg
region h:12-82
[157388]
3d5d
automatically matched to 2J01 H:83-171
complexed with mg
region h:83-170
[157389]
2v47
automatically matched to 2J01 H:12-82
region h:12-82
[152512]
2v47
automatically matched to 2J01 H:83-171
region h:83-171
[152513]
2v49
automatically matched to 2J01 H:12-82
region h:12-82
[152547]
2v49
automatically matched to 2J01 H:83-171
region h:83-171
[152548]
1vsp
automatically matched to 2J01 H:12-82
region f:12-82
[145793]
1vsp
automatically matched to 2J01 H:83-171
region f:83-171
[145794]
2hgq
automatically matched to 2J01 H:12-82
region h:12-82
[145342]
2hgq
automatically matched to 2J01 H:83-171
region h:83-171
[145343]
1vsa
automatically matched to 2J01 H:12-82
region f:12-82
[144519]
1vsa
automatically matched to 2J01 H:83-171
region f:83-171
[144520]
2hgj
automatically matched to 2J01 H:12-82
region h:12-82
[145310]
2hgj
automatically matched to 2J01 H:83-171
region h:83-171
[145311]
2hgu
automatically matched to 2J01 H:12-82
region h:12-82
[145374]
2hgu
automatically matched to 2J01 H:83-171
region h:83-171
[145375]
Deinococcus radiodurans
[TaxId: 1299]
[160798] (12)
SQ
Q9RSL3
8-82! SQ
Q9RSL3
83-172
2zjr
Representative structure
complexed with mg
region e:83-172
[154558]
2zjr
Representative structure
complexed with mg
region e:5-82
[154559]
1xbp
automatically matched to 2ZJR E:83-172
complexed with mul
region e:83-172
[145870]
1xbp
automatically matched to 2ZJR E:5-82
complexed with mul
region e:5-82
[145871]
2zjq
automatically matched to 2ZJR E:83-172
region e:83-172
[154527]
2zjq
automatically matched to 2ZJR E:5-82
region e:5-82
[154528]
3cf5
automatically matched to 2ZJR E:83-172
complexed with mg, txx
region e:83-172
[156543]
3cf5
automatically matched to 2ZJR E:5-82
complexed with mg, txx
region e:5-82
[156544]
2zjp
automatically matched to 2ZJR E:83-172
complexed with mg, nsh, zn
region e:83-172
[154495]
2zjp
automatically matched to 2ZJR E:5-82
complexed with mg, nsh, zn
region e:5-82
[154496]
3dll
automatically matched to 2ZJR E:83-172
complexed with mg, zld, zn
region e:83-172
[157782]
3dll
automatically matched to 2ZJR E:5-82
complexed with mg, zld, zn
region e:5-82
[157783]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk