Family: Autophagin-like

Pfam 03416

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: Cysteine proteinases [54000]
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
4. Superfamily: Cysteine proteinases [54001]
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
   uperfamily
5. Family: Autophagin-like [159858]
   Pfam 03416

Protein Domains:

1. Cysteine protease ATG4A [159859]
   Autophagin-2
   1. Human (Homo sapiens) [TaxId: 9606] [159860] (4)
      SQ Q8WYN0 26-359
      1. 2p82
         complexed with cl, edo
         1. region a:26-359 [149300]
      2. 2p82
         automatically matched to 2P82 A:26-359
         complexed with cl, edo
         1. region b:26-359 [149301]
      3. 2p82
         automatically matched to 2P82 A:26-359
         complexed with cl, edo
         1. region c:26-359 [149302]
      4. 2p82
         automatically matched to 2P82 A:26-359
         complexed with cl, edo
         1. region d:26-357 [149303]
2. Cysteine protease ATG4B [159861]
   Autophagin-1
   1. Human (Homo sapiens) [TaxId: 9606] [159862] (5)
      SQ Q9Y4P1 10-373! SQ Q9Y4P1 5-354
      1. 2z0d
         mutant
         1. region a:5-354 [145769]
      2. 2z0e
         automatically matched to 2Z0D A:5-354
         mutant
         1. region a:5-354 [145770]
      3. 2cy7
         automatically matched to 2D1I A:10-373
         1. region a:10-373 [146431]
      4. 2d1i
         1. region a:10-373 [146447]
      5. 2d1i
         automatically matched to 2D1I A:10-373
         1. region b:10-373 [146448]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk