Structural Classification of Proteins
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Superfamily: FAD-binding/transporter-associated domain-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: FAD-binding/transporter-associated domain-like [56175]
    consists of two alpha+beta subdomains
  4. Superfamily: FAD-binding/transporter-associated domain-like [56176]
    link to SUPERFAMILY database - Superfamily

Families:

  1. FAD-linked oxidases, N-terminal domain [56177] (5)
    1. Vanillyl-alcohol oxidase [56178]
      1. Fungus (Penicillium simplicissimum) [TaxId: 69488] [56179] (16)
        SQ P56216
        1. 1e8g picpicxref
          complexed with fad, fcr; mutant
          1. region a:6-273 [41718] picpiclink
          2. region b:6-273 [41719] picpiclink
        2. 1qlt picpicxref
          complexed with act, fad; mutant
          1. region a:6-273 [41720] picpiclink
          2. region b:6-273 [41721] picpiclink
        3. 1qlu picpicxref
          complexed with eug, fad; mutant
          1. region a:6-273 [41722] picpiclink
          2. region b:6-273 [41723] picpiclink
        4. 1ahv picpicxref
          complexed with fad, ncr
          1. region a:6-273 [41726] picpiclink
          2. region b:6-273 [41727] picpiclink
        5. 1vao picpicxref
          complexed with act, cl, fad
          1. region a:6-273 [41724] picpiclink
          2. region b:6-273 [41725] picpiclink
        6. 1w1k picpicxref
          complexed with eug, fad; mutant
          1. region a:6-273 [109060] picpiclink
          2. region b:6-273 [109062] picpiclink
        7. 1ahz picpicxref
          complexed with cl, ept, fad
          1. region a:6-273 [41740] picpiclink
          2. region b:6-273 [41741] picpiclink
        8. 1e8h picpicxref
          complexed with adp; mutant
          1. region a:6-273 [41728] picpiclink
          2. region b:6-273 [41729] picpiclink
        9. 1ahu picpicxref
          complexed with faa
          1. region a:6-273 [41732] picpiclink
          2. region b:6-273 [41733] picpiclink
        10. 1e0y picpicxref
          complexed with fad, fcr; mutant
          1. region a:6-273 [41730] picpiclink
          2. region b:6-273 [41731] picpiclink
        11. 1w1l picpicxref
          complexed with eug, fad; mutant
          1. region a:6-273 [109064] picpiclink
          2. region b:6-273 [109066] picpiclink
        12. 1w1j picpicxref
          complexed with eug, fad; mutant
          1. region a:6-273 [109056] picpiclink
          2. region b:6-273 [109058] picpiclink
        13. 2vao picpicxref
          complexed with eug, fad
          1. region a:6-273 [41736] picpiclink
          2. region b:6-273 [41737] picpiclink
        14. 1dzn picpicxref
          complexed with eug, fad; mutant
          1. region a:6-273 [41734] picpiclink
          2. region b:6-273 [41735] picpiclink
        15. 1e8f picpicxref
          mutant
          1. region a:6-273 [41738] picpiclink
          2. region b:6-273 [41739] picpiclink
        16. 1w1m picpicxref
          complexed with eug, fad; mutant
          1. region a:6-273 [109068] picpiclink
          2. region b:6-273 [109070] picpiclink
    2. Flavoprotein subunit of p-cresol methylhydroxylase [56180]
      the other subunit is a short-chain cytochrome c
      1. Pseudomonas putida [TaxId: 303] [56181] (5)
        1. 1wvf picpicxref
          automatically matched to d1diia2
          complexed with acy, cl, fad, gol
          1. region a:7-242 [121338] picpiclink
        2. 1wve picpicxrefxrefxrefxref
          automatically matched to d1diia2
          complexed with acy, cl, fad, hem, trs
          1. region a:7-242 [121332] picpiclink
        3. 1wve picpicxrefxrefxrefxref
          automatically matched to d1diia2
          complexed with acy, cl, fad, hem, trs
          1. region b:7-242 [121334] picpiclink
        4. 1diq picpicxrefxref
          1. region a:7-242 [41742] picpiclink
          2. region b:7-242 [41743] picpiclink
        5. 1dii picpicxrefxref
          1. region a:7-242 [41744] picpiclink
          2. region b:7-242 [41745] picpiclink
    3. D-lactate dehydrogenase [56182]
      1. Escherichia coli [TaxId: 562] [56183] (1)
        1. 1f0x picpicxref
          complexed with fad
          1. region a:9-273 [41746] picpiclink
          2. region b:1009-1273 [41747] picpiclink
    4. Cholesterol oxidase [64414]
      1. Brevibacterium sterolicum [TaxId: 1702] [64415] (2)
        1. 2i0k picpicxref
          automatically matched to d1i19a2
          complexed with cac, fad, gol, mn; mutant
          1. region a:58-273 [147481] picpiclink
        2. 1i19 picpicxref
          complexed with cac, edo, fad, mn
          1. region a:57-273 [61523] picpiclink
          2. region b:57-273 [61525] picpiclink
    5. Cytokinin dehydrogenase 1 [111207]
      1. Maize (Zea mays) [TaxId: 4577] [111208] (4)
        SQ Q9T0N8
        1. 1w1o picpicxref
          complexed with fad, nag
          1. region a:40-245 [109072] picpiclink
        2. 1w1q picpicxref
          complexed with fad, nag, zip
          1. region a:40-245 [109074] picpiclink
        3. 1w1r picpicxref
          complexed with fad, nag, zea
          1. region a:40-245 [109076] picpiclink
        4. 1w1s picpicxref
          complexed with emu, fad, nag
          1. region a:40-245 [109078] picpiclink
  2. Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain [56184] (2)
    1. Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain [56185]
      1. Escherichia coli [TaxId: 562] [56186] (5)
        1. 1uxy picpicxref
          complexed with epu, fad; mutant
          1. region a:3-200 [41748] picpiclink
        2. 2mbr picpicxref
          complexed with epu, fad
          1. region a:3-200 [41749] picpiclink
        3. 2q85 picpicxref
          automatically matched to d1mbba1
          complexed with 973, fad
          1. region a:3-200 [150118] picpiclink
        4. 1mbb picpicxref
          complexed with eeb, fad
          1. region a:3-200 [41750] picpiclink
        5. 1mbt picpicxref
          complexed with fad, so4
          1. region a:3-200 [41751] picpiclink
      2. Staphylococcus aureus [TaxId: 1280] [64416] (1)
        1. 1hsk picpicxref
          complexed with fad
          1. region a:15-208 [61241] picpiclink
  3. CO dehydrogenase flavoprotein N-terminal domain-like [56187] (6)
    1. Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain [56188]
      1. Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137] [56189] (7)
        1. 1n62 picpicxrefxrefxrefxrefxref
          complexed with cub, fad, fes, mcn, po4
          1. region c:1-177 [80095] picpiclink
          2. region f:1-177 [80101] picpiclink
        2. 1n60 picpicxrefxrefxrefxrefxref
          complexed with fad, fes, mcn, omo, po4
          1. region c:1-177 [80071] picpiclink
          2. region f:1-177 [80077] picpiclink
        3. 1n63 picpicxrefxrefxrefxrefxref
          complexed with cun, fad, fes, mcn, po4
          1. region c:1-177 [80107] picpiclink
          2. region f:1-177 [80113] picpiclink
        4. 1n61 picpicxrefxrefxrefxrefxref
          complexed with cun, fad, fes, mcn, po4
          1. region c:1-177 [80083] picpiclink
          2. region f:1-177 [80089] picpiclink
        5. 1n5w picpicxrefxrefxrefxrefxref
          complexed with cum, fad, fes, mcn, po4
          1. region c:1-177 [80050] picpiclink
          2. region f:1-177 [80056] picpiclink
        6. 1zxi picpicxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1n5wc2
          complexed with cu, cum, fad, fes, mcn, po4
          1. region c:1-177 [125777] picpiclink
        7. 1zxi picpicxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1n5wc2
          complexed with cu, cum, fad, fes, mcn, po4
          1. region f:1-177 [125781] picpiclink
      2. Hydrogenophaga pseudoflava [TaxId: 47421] [56190] (2)
        1. 1ffv picpicxrefxrefxrefxrefxref
          complexed with aro, csz, fad, fes, pcd
          1. region c:1-177 [41754] picpiclink
          2. region f:1-177 [41755] picpiclink
        2. 1ffu picpicxrefxrefxrefxrefxref
          complexed with aro, cdp, csz, fad, fes
          1. region c:1-177 [41756] picpiclink
          2. region f:1-177 [41757] picpiclink
    2. Xanthine oxidase, domain 3 (?) [56191]
      1. Cow (Bos taurus) [TaxId: 9913] [56192] (7)
        SQ P80457
        1. 1v97 picpicxrefxrefxrefxrefxref
          complexed with acy, ca, fad, fes, fyx, gol, mos, mte
          1. region a:192-414 [108441] picpiclink
          2. region b:192-414 [108447] picpiclink
        2. 1vdv picpicxrefxrefxrefxrefxref
          complexed with acy, ca, fad, fes, gol, mos, mte, ysh
          1. region a:192-414 [113619] picpiclink
          2. region b:192-414 [113625] picpiclink
        3. 1fo4 picpicxrefxrefxrefxrefxref
          complexed with ca, fad, fes, gol, mos, mte, sal
          1. region a:192-414 [41758] picpiclink
          2. region b:192-414 [41759] picpiclink
        4. 3b9j picpicxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1fiqb2
          complexed with 290, ca, fad, fes, mos, mte
          1. region b:224-414 [155003] picpiclink
        5. 3b9j picpicxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1fiqb2
          complexed with 290, ca, fad, fes, mos, mte
          1. region j:224-414 [155009] picpiclink
        6. 1fiq picpicxrefxrefxrefxrefxref
          complexed with fad, fes, gol, mos, mte, sal
          1. region b:224-414 [41760] picpiclink
        7. 1n5x picpicxrefxrefxrefxrefxref
          complexed with fad, fes, mos, mte, tei
          1. region a:192-414 [85347] picpiclink
          2. region b:192-414 [85353] picpiclink
    3. Xanthine dehydrogenase chain A, domain 3 [69829]
      1. Rhodobacter capsulatus [TaxId: 1061] [69830] (2)
        1. 1jro picpicxrefxrefxrefxrefxref
          complexed with ca, fad, fes, mos, mpn
          1. region a:179-345 [67140] picpiclink
          2. region c:179-345 [67146] picpiclink
          3. region e:179-345 [67152] picpiclink
          4. region g:179-345 [67158] picpiclink
        2. 1jrp picpicxrefxrefxrefxrefxref
          complexed with 141, ca, fad, fes, mos, mpn
          1. region a:179-345 [67164] picpiclink
          2. region c:179-345 [67170] picpiclink
          3. region e:179-345 [67176] picpiclink
          4. region g:179-345 [67182] picpiclink
    4. Quinoline 2-oxidoreductase medium subunit QorM [111209]
      1. Pseudomonas putida [TaxId: 303] [111210] (1)
        SQ P72222
        1. 1t3q picpicxrefxrefxrefxrefxref
          complexed with fad, fes, gol, mcn, smo, so4
          1. region c:1-176 [106372] picpiclink
          2. region f:1-176 [106378] picpiclink
    5. 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain [118141]
      1. Thauera aromatica [TaxId: 59405] [118142] (2)
        SQ O33820
        1. 1rm6 picpicxrefxrefxrefxrefxref
          complexed with cl, epe, fad, fes, fs4, k, na, pcd, so4
          1. region b:1-216 [111875] picpiclink
          2. region e:1-216 [111881] picpiclink
        2. 1sb3 picpicxrefxrefxrefxrefxref
          complexed with epe, fad, fes, fs4, pcd, so4
          1. region b:1-216 [112055] picpiclink
          2. region e:1-216 [112061] picpiclink
  4. CorC/HlyC domain-like [160820] (12)
    Pfam 03471; similar to the C-terminal subdomain of FAD-binding domain with transposition of strands 3 and 4; possible adenosine cofactor-binding domain
    1. Putative hemolysin SMU1693 [160821]
      HlyX
      1. Streptococcus mutans [TaxId: 1309] [160822] (1)
        SQ O68574 352-435
        1. 2rk5 picpic
          1. region a:5-88 [152108] picpiclink
    2. Hypothetical protein CT0541 [160823]
      1. Chlorobium tepidum [TaxId: 1097] [160824] (12)
        SQ Q8KEZ1 345-428
        1. 2pls picpic
          complexed with act, edo, fmt, mg
          1. region a:345-428 [149638] picpiclink
        2. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region b:345-428 [149639] picpiclink
        3. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region c:345-428 [149640] picpiclink
        4. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region d:345-427 [149641] picpiclink
        5. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region e:345-427 [149642] picpiclink
        6. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region f:345-427 [149643] picpiclink
        7. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region g:345-427 [149644] picpiclink
        8. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region h:345-428 [149645] picpiclink
        9. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region i:345-428 [149646] picpiclink
        10. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region j:345-428 [149647] picpiclink
        11. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region k:345-428 [149648] picpiclink
        12. 2pls picpic
          automatically matched to 2PLS A:345-428
          complexed with act, edo, fmt, mg
          1. region l:345-428 [149649] picpiclink
    3. Uncharacterized protein NE2227 [160825]
      1. Nitrosomonas europaea [TaxId: 915] [160826] (2)
        SQ Q82SS8 431-515
        1. 2p13 picpic
          complexed with acy
          1. region a:431-515 [149152] picpiclink
        2. 2p13 picpic
          automatically matched to 2P13 A:431-515
          complexed with acy
          1. region b:431-515 [149153] picpiclink
    4. Hypothetical protein HI0107 [160827]
      1. Haemophilus influenzae [TaxId: 727] [160828] (1)
        SQ Q57017 343-420
        1. 2o1r picpic
          complexed with edo, peg
          1. region a:1-78 [148549] picpiclink
    5. Putative protein NMB1485 [160829]
      1. Neisseria meningitidis [TaxId: 487] [160830] (1)
        SQ Q9JYP7 441-516
        1. 2o3g picpic
          complexed with edo
          1. region a:180-255 [148576] picpiclink
    6. Putative hemolysin EF0700 [160831]
      1. Enterococcus faecalis [TaxId: 1351] [160832] (1)
        SQ Q837X5 350-433
        1. 2r2z picpic
          complexed with zn
          1. region a:5-88 [151544] picpiclink
    7. Hypothetical protein PG0272 [160833]
      1. Porphyromonas gingivalis [TaxId: 837] [160834] (1)
        SQ Q7MXD1 327-413
        1. 2nqw picpic
          complexed with gol
          1. region a:4-90 [148346] picpiclink
    8. Uncharacterized protein NMB0537 [160835]
      1. Neisseria meningitidis [TaxId: 487] [160836] (4)
        SQ Q9K0P8 191-274
        1. 2pli picpic
          complexed with act, gol, zn
          1. region a:5-88 [149630] picpiclink
        2. 2pli picpic
          automatically matched to 2PLI A:5-88
          complexed with act, gol, zn
          1. region b:6-87 [149631] picpiclink
        3. 2pli picpic
          automatically matched to 2PLI A:5-88
          complexed with act, gol, zn
          1. region c:7-87 [149632] picpiclink
        4. 2pli picpic
          automatically matched to 2PLI A:5-88
          complexed with act, gol, zn
          1. region d:7-87 [149633] picpiclink
    9. Hypothetical protein HD1797 [160837]
      1. Haemophilus ducreyi [TaxId: 730] [160838] (2)
        SQ Q7VKS4 347-428
        1. 2p4p picpic
          complexed with ca, gol, mg, mly
          1. region a:1-82 [149217] picpiclink
        2. 2p4p picpic
          automatically matched to 2P4P A:1-82
          complexed with ca, gol, mg, mly
          1. region b:6-82 [149218] picpiclink
    10. Hemolysin TlyC [160839]
      1. Xylella fastidiosa [TaxId: 2371] [160840] (2)
        SQ Q87DZ3 353-439! SQ Q87DZ3 355-439
        1. 2oai picpic
          complexed with ca, edo, mly
          1. region a:5-91 [148705] picpiclink
        2. 2r8d picpic
          complexed with mg, mly, mn
          1. region a:7-91 [151714] picpiclink
    11. Probable hemolysin CV0231 [160841]
      1. Chromobacterium violaceum [TaxId: 536] [160842] (6)
        SQ Q7P1I2 341-427
        1. 3ded picpic
          complexed with ca
          1. region a:341-427 [157567] picpiclink
        2. 3ded picpic
          automatically matched to 3DED A:341-427
          complexed with ca
          1. region b:341-426 [157568] picpiclink
        3. 3ded picpic
          automatically matched to 3DED A:341-427
          complexed with ca
          1. region c:341-427 [157569] picpiclink
        4. 3ded picpic
          automatically matched to 3DED A:341-427
          complexed with ca
          1. region d:341-426 [157570] picpiclink
        5. 3ded picpic
          automatically matched to 3DED A:341-427
          complexed with ca
          1. region e:341-427 [157571] picpiclink
        6. 3ded picpic
          automatically matched to 3DED A:341-427
          complexed with ca
          1. region f:341-426 [157572] picpiclink
    12. Uncharacterized protein Cgl1194/Cg1349 [160843]
      1. Corynebacterium glutamicum [TaxId: 1718] [160844] (1)
        SQ Q8NR63 356-453
        1. 2p3h picpic
          complexed with br, edo
          1. region a:5-102 [149177] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk