Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: FAD-binding/transporter-associated domain-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: FAD-binding/transporter-associated domain-like [56175]
    consists of two alpha+beta subdomains
  4. Superfamily: FAD-binding/transporter-associated domain-like [56176]
    link to SUPERFAMILY database - Superfamily

Families:

  1. FAD-linked oxidases, N-terminal domain [56177] (5)
    1. Vanillyl-alcohol oxidase [56178]
      1. Fungus (Penicillium simplicissimum) [TaxId: 69488] [56179] (16) picpic
        SQ P56216
    2. Flavoprotein subunit of p-cresol methylhydroxylase [56180]
      the other subunit is a short-chain cytochrome c
      1. Pseudomonas putida [TaxId: 303] [56181] (5) picpic
    3. D-lactate dehydrogenase [56182]
      1. Escherichia coli [TaxId: 562] [56183] (1) picpic
    4. Cholesterol oxidase [64414]
      1. Brevibacterium sterolicum [TaxId: 1702] [64415] (2) picpic
    5. Cytokinin dehydrogenase 1 [111207]
      1. Maize (Zea mays) [TaxId: 4577] [111208] (4) picpic
        SQ Q9T0N8
  2. Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain [56184] (2)
    1. Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain [56185]
      1. Escherichia coli [TaxId: 562] [56186] (5) picpic
      2. Staphylococcus aureus [TaxId: 1280] [64416] (1) picpic
  3. CO dehydrogenase flavoprotein N-terminal domain-like [56187] (6)
    1. Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain [56188]
      1. Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137] [56189] (7) picpic
      2. Hydrogenophaga pseudoflava [TaxId: 47421] [56190] (2) picpic
    2. Xanthine oxidase, domain 3 (?) [56191]
      1. Cow (Bos taurus) [TaxId: 9913] [56192] (7) picpic
        SQ P80457
    3. Xanthine dehydrogenase chain A, domain 3 [69829]
      1. Rhodobacter capsulatus [TaxId: 1061] [69830] (2) picpic
    4. Quinoline 2-oxidoreductase medium subunit QorM [111209]
      1. Pseudomonas putida [TaxId: 303] [111210] (1) picpic
        SQ P72222
    5. 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain [118141]
      1. Thauera aromatica [TaxId: 59405] [118142] (2) picpic
        SQ O33820
  4. CorC/HlyC domain-like [160820] (12)
    Pfam 03471; similar to the C-terminal subdomain of FAD-binding domain with transposition of strands 3 and 4; possible adenosine cofactor-binding domain
    1. Putative hemolysin SMU1693 [160821]
      HlyX
      1. Streptococcus mutans [TaxId: 1309] [160822] (1) picpic
        SQ O68574 352-435
    2. Hypothetical protein CT0541 [160823]
      1. Chlorobium tepidum [TaxId: 1097] [160824] (12) picpic
        SQ Q8KEZ1 345-428
    3. Uncharacterized protein NE2227 [160825]
      1. Nitrosomonas europaea [TaxId: 915] [160826] (2) picpic
        SQ Q82SS8 431-515
    4. Hypothetical protein HI0107 [160827]
      1. Haemophilus influenzae [TaxId: 727] [160828] (1) picpic
        SQ Q57017 343-420
    5. Putative protein NMB1485 [160829]
      1. Neisseria meningitidis [TaxId: 487] [160830] (1) picpic
        SQ Q9JYP7 441-516
    6. Putative hemolysin EF0700 [160831]
      1. Enterococcus faecalis [TaxId: 1351] [160832] (1) picpic
        SQ Q837X5 350-433
    7. Hypothetical protein PG0272 [160833]
      1. Porphyromonas gingivalis [TaxId: 837] [160834] (1) picpic
        SQ Q7MXD1 327-413
    8. Uncharacterized protein NMB0537 [160835]
      1. Neisseria meningitidis [TaxId: 487] [160836] (4) picpic
        SQ Q9K0P8 191-274
    9. Hypothetical protein HD1797 [160837]
      1. Haemophilus ducreyi [TaxId: 730] [160838] (2) picpic
        SQ Q7VKS4 347-428
    10. Hemolysin TlyC [160839]
      1. Xylella fastidiosa [TaxId: 2371] [160840] (2) picpic
        SQ Q87DZ3 353-439! SQ Q87DZ3 355-439
    11. Probable hemolysin CV0231 [160841]
      1. Chromobacterium violaceum [TaxId: 536] [160842] (6) picpic
        SQ Q7P1I2 341-427
    12. Uncharacterized protein Cgl1194/Cg1349 [160843]
      1. Corynebacterium glutamicum [TaxId: 1718] [160844] (1) picpic
        SQ Q8NR63 356-453

Enter search key:

MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk