Structural Classification of Proteins
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Family: FAD-linked oxidases, N-terminal domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: FAD-binding/transporter-associated domain-like [56175]
    consists of two alpha+beta subdomains
  4. Superfamily: FAD-binding/transporter-associated domain-like [56176]
    link to SUPERFAMILY database - Superfamily
  5. Family: FAD-linked oxidases, N-terminal domain [56177]

Protein Domains:

  1. Vanillyl-alcohol oxidase [56178]
    1. Fungus (Penicillium simplicissimum) [TaxId: 69488] [56179] (16)
      SQ P56216
      1. 1e8g picpicxref
        complexed with fad, fcr; mutant
        1. region a:6-273 [41718] picpiclink
        2. region b:6-273 [41719] picpiclink
      2. 1qlt picpicxref
        complexed with act, fad; mutant
        1. region a:6-273 [41720] picpiclink
        2. region b:6-273 [41721] picpiclink
      3. 1qlu picpicxref
        complexed with eug, fad; mutant
        1. region a:6-273 [41722] picpiclink
        2. region b:6-273 [41723] picpiclink
      4. 1ahv picpicxref
        complexed with fad, ncr
        1. region a:6-273 [41726] picpiclink
        2. region b:6-273 [41727] picpiclink
      5. 1vao picpicxref
        complexed with act, cl, fad
        1. region a:6-273 [41724] picpiclink
        2. region b:6-273 [41725] picpiclink
      6. 1w1k picpicxref
        complexed with eug, fad; mutant
        1. region a:6-273 [109060] picpiclink
        2. region b:6-273 [109062] picpiclink
      7. 1ahz picpicxref
        complexed with cl, ept, fad
        1. region a:6-273 [41740] picpiclink
        2. region b:6-273 [41741] picpiclink
      8. 1e8h picpicxref
        complexed with adp; mutant
        1. region a:6-273 [41728] picpiclink
        2. region b:6-273 [41729] picpiclink
      9. 1ahu picpicxref
        complexed with faa
        1. region a:6-273 [41732] picpiclink
        2. region b:6-273 [41733] picpiclink
      10. 1e0y picpicxref
        complexed with fad, fcr; mutant
        1. region a:6-273 [41730] picpiclink
        2. region b:6-273 [41731] picpiclink
      11. 1w1l picpicxref
        complexed with eug, fad; mutant
        1. region a:6-273 [109064] picpiclink
        2. region b:6-273 [109066] picpiclink
      12. 1w1j picpicxref
        complexed with eug, fad; mutant
        1. region a:6-273 [109056] picpiclink
        2. region b:6-273 [109058] picpiclink
      13. 2vao picpicxref
        complexed with eug, fad
        1. region a:6-273 [41736] picpiclink
        2. region b:6-273 [41737] picpiclink
      14. 1dzn picpicxref
        complexed with eug, fad; mutant
        1. region a:6-273 [41734] picpiclink
        2. region b:6-273 [41735] picpiclink
      15. 1e8f picpicxref
        mutant
        1. region a:6-273 [41738] picpiclink
        2. region b:6-273 [41739] picpiclink
      16. 1w1m picpicxref
        complexed with eug, fad; mutant
        1. region a:6-273 [109068] picpiclink
        2. region b:6-273 [109070] picpiclink
  2. Flavoprotein subunit of p-cresol methylhydroxylase [56180]
    the other subunit is a short-chain cytochrome c
    1. Pseudomonas putida [TaxId: 303] [56181] (5)
      1. 1wvf picpicxref
        automatically matched to d1diia2
        complexed with acy, cl, fad, gol
        1. region a:7-242 [121338] picpiclink
      2. 1wve picpicxrefxrefxrefxref
        automatically matched to d1diia2
        complexed with acy, cl, fad, hem, trs
        1. region a:7-242 [121332] picpiclink
      3. 1wve picpicxrefxrefxrefxref
        automatically matched to d1diia2
        complexed with acy, cl, fad, hem, trs
        1. region b:7-242 [121334] picpiclink
      4. 1diq picpicxrefxref
        1. region a:7-242 [41742] picpiclink
        2. region b:7-242 [41743] picpiclink
      5. 1dii picpicxrefxref
        1. region a:7-242 [41744] picpiclink
        2. region b:7-242 [41745] picpiclink
  3. D-lactate dehydrogenase [56182]
    1. Escherichia coli [TaxId: 562] [56183] (1)
      1. 1f0x picpicxref
        complexed with fad
        1. region a:9-273 [41746] picpiclink
        2. region b:1009-1273 [41747] picpiclink
  4. Cholesterol oxidase [64414]
    1. Brevibacterium sterolicum [TaxId: 1702] [64415] (2)
      1. 2i0k picpicxref
        automatically matched to d1i19a2
        complexed with cac, fad, gol, mn; mutant
        1. region a:58-273 [147481] picpiclink
      2. 1i19 picpicxref
        complexed with cac, edo, fad, mn
        1. region a:57-273 [61523] picpiclink
        2. region b:57-273 [61525] picpiclink
  5. Cytokinin dehydrogenase 1 [111207]
    1. Maize (Zea mays) [TaxId: 4577] [111208] (4)
      SQ Q9T0N8
      1. 1w1o picpicxref
        complexed with fad, nag
        1. region a:40-245 [109072] picpiclink
      2. 1w1q picpicxref
        complexed with fad, nag, zip
        1. region a:40-245 [109074] picpiclink
      3. 1w1r picpicxref
        complexed with fad, nag, zea
        1. region a:40-245 [109076] picpiclink
      4. 1w1s picpicxref
        complexed with emu, fad, nag
        1. region a:40-245 [109078] picpiclink

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk