Structural Classification of Proteins
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Superfamily: DNase I-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: DNase I-like [56218]
    contains beta-sandwich; duplication of alpha+beta motif
  4. Superfamily: DNase I-like [56219]
    link to SUPERFAMILY database - Superfamily

Families:

  1. DNase I-like [56220] (8)
    1. DNA-repair enzyme exonuclease III [56221]
      1. Escherichia coli [TaxId: 562] [56222] (1) picpic
    2. DNA repair endonuclease Hap1 [56223]
      Major apurinic/apyrimidinic endonuclease APE1
      1. Human (Homo sapiens) [TaxId: 9606] [56224] (9) picpic
    3. Deoxyribonuclease I [56225]
      1. Cow (Bos taurus) [TaxId: 9913] [56226] (11) picpic
    4. Endonuclease domain of LINE-1 reverse transcriptase homolog [111211]
      1. Human (Homo sapiens) [TaxId: 9606] [111212] (1) picpic
        SQ P08547 2-237
    5. Cytolethal distending toxin subunit B [111213]
      1. Haemophilus ducreyi [TaxId: 730] [111214] (1) picpic
        SQ O06523 23-283
      2. Actinobacillus actinomycetemcomitans [TaxId: 714] [143900] (2) picpic
        SQ Q7DK12 23-283
      3. Escherichia coli [TaxId: 562] [143901] (1) picpic
        SQ Q46669 19-269
    6. Endonuclease domain of TRAS1 retrotransposon (ORF2) [111215]
      1. Silkworm (Bombyx mori) [TaxId: 7091] [111216] (1) picpic
        SQ Q93139 1-184
  2. Inositol polyphosphate 5-phosphatase (IPP5) [64422] (2)
    1. Synaptojanin, IPP5C domain [64423]
      1. Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [64424] (2) picpic
    2. Salivary nitrophorin [103310]
      heme-binding homologue of IPP5
      1. Bedbug (Cimex lectularius) [TaxId: 79782] [103311] (5) picpic
        SQ O7674 23-302
  3. Sphingomyelin phosphodiesterase-like [143902] (2)
    part of Pfam 03372
    1. Sphingomyelin phosphodiesterase C [143903]
      1. Bacillus cereus [TaxId: 1396] [143904] (10) picpic
        SQ P11889 34-332
      2. Listeria ivanovii [TaxId: 1638] [143905] (1) picpic
        SQ Q9RLV9 41-333
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk