Structural Classification of Proteins
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Family: YfcE-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Metallo-dependent phosphatases [56299]
    4 layers: alpha/beta/beta/alpha; mixed beta sheets; contains duplication
  4. Superfamily: Metallo-dependent phosphatases [56300]
    different families of this superfamily are groupped in a single Pfam family, Pfam 00149
    link to SUPERFAMILY database - Superfamily
  5. Family: YfcE-like [111233]

Protein Domains:

  1. Putative phosphodiesterase MJ0936 [111234]
    1. Methanococcus jannaschii [TaxId: 2190] [111235] (7)
      SQ Q58346
      1. 1s3l picpic
        Structural genomics target
        complexed with po4, unx
        1. chain a [105241] picpiclink
        2. chain b [105242] picpiclink
      2. 1s3m picpic
        Structural genomics target
        complexed with ni
        1. chain a [105243] picpiclink
        2. chain b [105244] picpiclink
      3. 1s3n picpic
        Structural genomics target
        complexed with mn
        1. chain a [105245] picpiclink
        2. chain b [105246] picpiclink
      4. 2ahd picpic
        automatically matched to d1s3la_
        1. region a:1-165 [126752] picpiclink
      5. 2ahd picpic
        automatically matched to d1s3la_
        1. region b:201-365 [126753] picpiclink
      6. 2ahd picpic
        automatically matched to d1s3la_
        1. region c:1-165 [126754] picpiclink
      7. 2ahd picpic
        automatically matched to d1s3la_
        1. region d:201-365 [126755] picpiclink
  2. Phosphodiesterase yfcE [111236]
    1. Escherichia coli [TaxId: 562] [111237] (1)
      SQ P76495
      1. 1su1 picpic
        Structural genomics target
        complexed with so4, zn
        1. chain a [106016] picpiclink
        2. chain b [106017] picpiclink
        3. chain c [106018] picpiclink
        4. chain d [106019] picpiclink
  3. Vacuolar protein sorting 29, VPS29 [143935]
    1. Mouse (Mus musculus) [TaxId: 10090] [143936] (5)
      SQ Q9QZ88 1-182
      1. 1z2w picpic
        complexed with gol, mn
        1. region a:1-182 [124390] picpiclink
      2. 1z2w picpic
        automatically matched to 1Z2W A:1-182
        complexed with gol, mn
        1. region b:1-182 [124391] picpiclink
      3. 1z2x picpic
        automatically matched to 1Z2W A:1-182
        1. region a:1-182 [124392] picpiclink
      4. 1z2x picpic
        automatically matched to 1Z2W A:1-182
        1. region b:1-182 [124393] picpiclink
      5. 1w24 picpic
        automatically matched to 1Z2W A:1-182
        1. region a:1-181 [120579] picpiclink
    2. Cryptosporidium parvum [TaxId: 5807] [143937] (2)
      SQ Q5CYJ7 5-197
      1. 2a22 picpic
        1. region a:4-196 [126025] picpiclink
      2. 2a22 picpic
        automatically matched to 2A22 A:4-196
        1. region b:4-196 [126026] picpiclink
    3. Homo sapiens [TaxId: 9606] [160872] (2)
      1. 2r17 picpic
        automatically matched to d1z2wa1
        complexed with gol
        1. region a:1-181 [151510] picpiclink
      2. 2r17 picpic
        automatically matched to d1z2wa1
        complexed with gol
        1. region b:1-181 [151511] picpiclink
  4. Uncharacterized protein SP1879 [160873]
    1. Streptococcus pneumoniae [TaxId: 1313] [160874] (1)
      SQ Q97NX4 1-173
      1. 3ck2 picpic
        complexed with cl, mn, srt
        1. region a:1-173 [156724] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk