Structural Classification of Proteins
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Fold: LDH C-terminal domain-like

unusual fold, defines family

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: LDH C-terminal domain-like [56326]
    unusual fold, defines family

Superfamilies:

  1. LDH C-terminal domain-like [56327] (2)
    link to SUPERFAMILY database - Superfamily
    1. Lactate & malate dehydrogenases, C-terminal domain [56328] (28)
      N-terminal domain is NAD-binding module (alpha/beta Rossmann-fold domain)
      1. Malate dehydrogenase [56329]
        1. Pig (Sus scrofa) [TaxId: 9823] [56330] (3) picpic
        2. Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558] [56331] (1) picpic
        3. Flaveria bidentis, chloroplast [TaxId: 4224] [56332] (1) picpic
        4. Escherichia coli [TaxId: 562] [56333] (8) picpic
        5. Thermus flavus [TaxId: 274] [56334] (2) picpic
        6. Thermus thermophilus [TaxId: 274] [82806] (9) picpic
          identical sequence to that from the Thermus flavus enzyme
        7. Archaeon Haloarcula marismortui [TaxId: 2238] [56335] (17) picpic
        8. Aquaspirillum arcticum [TaxId: 87645] [56336] (3) picpic
        9. Chloroflexus aurantiacus [TaxId: 1108] [69840] (7) picpic
          SQ P80040
        10. Chlorobium tepidum [TaxId: 1097] [69841] (1) picpic
        11. Chlorobium vibrioforme [TaxId: 1098] [69842] (2) picpic
      2. L-2-hydroxyisocapronate dehydrogenase, L-HICDH [56337]
        1. Lactobacillus confusus [TaxId: 1583] [56338] (1) picpic
      3. Lactate dehydrogenase [56339]
        1. Pig (Sus scrofa) [TaxId: 9823] [56340] (3) picpic
        2. Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606] [64444] (2) picpic
        3. Human (Homo sapiens), muscle isoform (M chain) [TaxId: 9606] [64445] (1) picpic
        4. Mouse (Mus musculus) [TaxId: 10090] [56341] (4) picpic
        5. Dogfish (Squalus acanthias) [TaxId: 7797] [56342] (3) picpic
        6. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [56343] (9) picpic
        7. Plasmodium berghei [TaxId: 5821] [103325] (7) picpic
        8. Toxoplasma gondii [TaxId: 5811] [103326] (4) picpic
        9. Bacillus stearothermophilus [TaxId: 1422] [56344] (9) picpic
        10. Lactobacillus casei [TaxId: 1582] [56345] (1) picpic
        11. Lactobacillus pentosus [TaxId: 1589] [69843] (1) picpic
        12. Bifidobacterium longum, strain am101-2 [TaxId: 216816] [56346] (2) picpic
        13. Thermotoga maritima [TaxId: 2336] [56347] (1) picpic
        14. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [111253] (2) picpic
          SQ O08349
        15. Clostridium thermocellum [TaxId: 1515] [118160] (1) picpic
          SQ Q4CDK5
      4. MJ0490, lactate/malate dehydrogenase [64446]
        1. Archaeon Methanococcus jannaschii [TaxId: 2190] [64447] (2) picpic
    2. AglA-like glucosidase [90050] (5)
      family 4 glycosyl hydrolase
      1. Alpha-glucosidase AglA [90051]
        1. Thermotoga maritima [TaxId: 2336] [90052] (1) picpic
          TM1834
      2. Putative alpha-glucosidase TM0752 [103327]
        1. Thermotoga maritima [TaxId: 2336] [103328] (1) picpic
      3. Maltose-6'-phosphate glucosidase GlvA [103329]
        1. Bacillus subtilis [TaxId: 1423] [103330] (1) picpic
          SQ P54716
      4. 6-phospho-beta-glucosidase [111254]
        1. Bacillus stearothermophilus [TaxId: 1422] [111255] (1) picpic
          SQ P84135
        2. Thermotoga maritima [TaxId: 2336] [111256] (3) picpic
          SQ Q9X108
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk