Structural Classification of Proteins
Fold: DNA breaking-rejoining enzymes
core: alpha3-beta3-alpha4; one side of beta-sheet is exposed
Lineage:
Root:
scop
Class:
Alpha and beta proteins (a+b)
[53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold:
DNA breaking-rejoining enzymes
[56348]
core: alpha3-beta3-alpha4; one side of beta-sheet is exposed
Superfamilies:
DNA breaking-rejoining enzymes
[56349] (2)
uperfamily
Lambda integrase-like, catalytic core
[56350] (5)
Integrase [56351]
Bacteriophage HP1
[TaxId: 10690]
[56352] (1)
1aih
complexed with mg, so4
chain a
[42149]
chain b
[42150]
chain c
[42151]
chain d
[42152]
Integrase (Int) [56353]
Bacteriophage lambda
[TaxId: 10710]
[56354] (8)
1ae9
mutant
chain a
[42153]
chain b
[42154]
1p7d
chain a
[94219]
chain b
[94220]
1z1b
automatically matched to d1p7da_
mutant
region a:74-356
[124347]
1z1b
automatically matched to d1p7da_
mutant
region b:74-356
[124349]
1z1g
automatically matched to d1ae9a_
mutant
region a:177-355
[124354]
1z1g
automatically matched to d1ae9a_
mutant
region b:177-355
[124356]
1z1g
automatically matched to d1ae9a_
mutant
region c:177-355
[124358]
1z1g
automatically matched to d1ae9a_
mutant
region d:177-355
[124360]
Cre recombinase [56355]
Bacteriophage P1
[TaxId: 10678]
[56356] (24)
SQ
P06956
20-341
1f44
mutant
region a:130-343
[64983]
1xo0
mutant
region a:130-341
[115675]
region b:130-341
[115677]
2hof
automatically matched to d1crxa2
mutant
region a:130-341
[147314]
2hof
automatically matched to d1crxa2
mutant
region b:130-341
[147316]
2hoi
automatically matched to d1crxa2
mutant
region a:130-341
[147318]
2hoi
automatically matched to d1crxa2
mutant
region b:130-341
[147320]
2hoi
automatically matched to d1crxa2
mutant
region g:130-341
[147322]
2hoi
automatically matched to d1crxa2
mutant
region h:130-341
[147324]
4crx
mutant
region a:130-341
[42155]
region b:130-341
[42156]
1crx
protein/DNA complex
region a:130-341
[42157]
region b:130-341
[42158]
1kbu
region a:130-341
[72285]
region b:130-341
[72287]
1drg
mutant
region a:130-343
[64793]
2crx
protein/DNA complex
region a:130-341
[42159]
region b:130-341
[42160]
3crx
protein/DNA complex; mutant
region a:130-341
[42161]
region b:130-341
[42162]
1pvp
mutant
region a:130-341
[95178]
region b:130-341
[95180]
1ma7
mutant
region a:130-341
[84922]
region b:130-341
[84924]
1q3u
complexed with iod, mg, ump
region a:130-341
[95753]
region b:130-341
[95755]
region e:130-341
[95757]
region f:130-341
[95759]
1xns
region a:130-341
[115648]
region b:130-341
[115650]
1pvr
mutant
region a:130-341
[95186]
region b:130-341
[95188]
1nzb
complexed with iod, mg, ump
region a:130-341
[92366]
region b:130-341
[92368]
region e:130-341
[92370]
region f:130-341
[92372]
1q3v
complexed with a3p, iod, mg, ump
region a:130-341
[95761]
region b:130-341
[95763]
region e:130-341
[95765]
region f:130-341
[95767]
5crx
mutant
region a:130-340
[42163]
region b:130-314
[42164]
1pvq
mutant
region a:130-341
[95182]
region b:130-341
[95184]
1ouq
complexed with a3p, iod, mg, ump
region a:130-341
[93558]
region b:130-341
[93560]
region e:130-341
[93562]
region f:130-341
[93564]
Recombinase XerD [56357]
Escherichia coli
[TaxId: 562]
[56358] (1)
1a0p
region a:111-292
[42165]
Flp recombinase [56359]
Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]
[56360] (3)
1p4e
complexed with 2po, ptr; mutant
region a:136-422
[87765]
region b:136-430
[87767]
region c:137-422
[87769]
region d:136-422
[87771]
1flo
protein/DNA complex; complexed with phs
region a:135-423
[42166]
region b:135-423
[42167]
region c:137-423
[42168]
region d:138-423
[42169]
1m6x
complexed with ptr; mutant
region a:136-422
[78709]
region b:136-422
[78711]
region c:137-422
[78713]
region d:137-422
[78715]
Eukaryotic DNA topoisomerase I, catalytic core
[56361] (2)
Eukaryotic DNA topoisomerase I, catalytic core [56362]
Human (Homo sapiens)
[TaxId: 9606]
[56363] (15)
SQ
P11387
203-765 ! SQ
P11387
203-767
1k4t
complexed with hg, pg4, ptr, tgp, ttc, ttg
region a:431-640,a:713-765
[77264]
1a31
protein/DNA complex; complexed with 5iu
region a:431-626,a:720-765
[42170]
1rrj
complexed with ttc, ttg; mutant
region a:431-635,a:713-765
[105079]
1a35
protein/DNA complex; complexed with bru; mutant
region a:431-635,a:713-765
[42171]
1rr8
complexed with ttc, ttg; mutant
region c:431-608,c:708-765
[105076]
1ej9
protein/DNA complex; mutant
region a:431-633,a:714-765
[42172]
1a36
protein/DNA complex; mutant
region a:431-633,a:713-765
[42173]
1sc7
automatically matched to d1ej9a1
complexed with m38, pg4, tgp
region a:431-633,a:714-765
[118945]
1seu
automatically matched to d1ej9a1
complexed with sa3, tgp; mutant
region a:431-633,a:714-765
[118953]
1tl8
automatically matched to d1ej9a1
complexed with ai3, tpc
region a:431-633,a:714-765
[119300]
1t8i
automatically matched to d1ej9a1
complexed with ehd, tgp
region a:431-633,a:714-765
[119173]
1nh3
complexed with car, gng, ptr, ubb
region a:431-626,a:719-765
[85710]
1lpq
complexed with 8og; mutant
region a:431-633,a:713-765
[74175]
1k4s
complexed with ido, ptr, spt
region a:431-632,a:708-765
[77261]
1r49
mutant
region a:431-633,a:719-765
[96984]
Vaccinia virus
[TaxId: 10245]
[56364] (1)
1a41
complexed with so4
chain a
[42174]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk