Structural Classification of Proteins
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Superfamily: DNA breaking-rejoining enzymes

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: DNA breaking-rejoining enzymes [56348]
    core: alpha3-beta3-alpha4; one side of beta-sheet is exposed
  4. Superfamily: DNA breaking-rejoining enzymes [56349]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Lambda integrase-like, catalytic core [56350] (5)
    1. Integrase [56351]
      1. Bacteriophage HP1 [TaxId: 10690] [56352] (1) picpic
    2. Integrase (Int) [56353]
      1. Bacteriophage lambda [TaxId: 10710] [56354] (8) picpic
    3. Cre recombinase [56355]
      1. Bacteriophage P1 [TaxId: 10678] [56356] (24) picpic
        SQ P06956 20-341
    4. Recombinase XerD [56357]
      1. Escherichia coli [TaxId: 562] [56358] (1) picpic
    5. Flp recombinase [56359]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [56360] (3) picpic
  2. Eukaryotic DNA topoisomerase I, catalytic core [56361] (2)
    1. Eukaryotic DNA topoisomerase I, catalytic core [56362]
      1. Human (Homo sapiens) [TaxId: 9606] [56363] (15) picpic
        SQ P11387 203-765 ! SQ P11387 203-767
      2. Vaccinia virus [TaxId: 10245] [56364] (1) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk