Structural Classification of Proteins
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Superfamily: Penicillin binding protein dimerisation domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Penicillin binding protein dimerisation domain [56518]
    unusual fold
  4. Superfamily: Penicillin binding protein dimerisation domain [56519]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Penicillin binding protein dimerisation domain [56520] (2)
    contains an insert subdomain of ClpS-like fold
    1. Penicillin-binding protein 2x (pbp-2x), N-terminal domain [56521]
      the insert subdomain (residues 93-183) is usually disordered in the structures
      1. Streptococcus pneumoniae [TaxId: 1313] [56522] (6)
        1. 1qme picpicxrefxref
          complexed with so4
          1. region a:71-263 [42560] picpiclink
        2. 1pyy picpicxrefxref
          complexed with mpd, osu, so4; mutant
          1. region a:73-263 [95387] picpiclink
        3. 1qmf picpicxrefxref
          complexed with ces, kef
          1. region a:71-263 [42561] picpiclink
        4. 1rp5 picpicxrefxref
          the insert subdomain is fully ordered
          complexed with so4
          1. region a:64-263 [97696] picpiclink
          2. region b:64-263 [97700] picpiclink
        5. 1k25 picpicxrefxref
          mutant
          1. region a:67-263 [68035] picpiclink
          2. region b:1066-1263 [68039] picpiclink
          3. region c:2067-2263 [68043] picpiclink
          4. region d:3066-3263 [68047] picpiclink
        6. 1pmd picpicxrefxref
          CA-atoms only
          1. region a:76-263 [42562] picpiclink
    2. Penicillin binding protein 2a (PBP2A), middle domain [82824]
      the insert subdomain (residues 168-239) is fully ordered
      1. Staphylococcus aureus [TaxId: 1280] [82825] (5)
        SQ O54286 27-668
        1. 1vqq picpicxrefxref
          complexed with cd, cl; mutant
          1. region a:139-327 [114010] picpiclink
          2. region b:139-327 [114013] picpiclink
        2. 1mws picpicxrefxref
          complexed with cd, cl, nc1; mutant
          1. region a:139-327 [79593] picpiclink
          2. region b:139-327 [79596] picpiclink
        3. 1mwt picpicxrefxref
          complexed with cd, cl, pg1; mutant
          1. region a:139-327 [79599] picpiclink
          2. region b:139-327 [79602] picpiclink
        4. 1mwu picpicxrefxref
          complexed with cd, cl, mc1; mutant
          1. region a:139-327 [79605] picpiclink
          2. region b:139-327 [79608] picpiclink
        5. 1mwr picpicxrefxref
          complexed with cd, cl, mse; mutant
          1. region a:139-327 [79587] picpiclink
          2. region b:139-327 [79590] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk