Structural Classification of Proteins
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Family: Penicillin binding protein dimerisation domain

contains an insert subdomain of ClpS-like fold

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Penicillin binding protein dimerisation domain [56518]
    unusual fold
  4. Superfamily: Penicillin binding protein dimerisation domain [56519]
    link to SUPERFAMILY database - Superfamily
  5. Family: Penicillin binding protein dimerisation domain [56520]
    contains an insert subdomain of ClpS-like fold

Protein Domains:

  1. Penicillin-binding protein 2x (pbp-2x), N-terminal domain [56521]
    the insert subdomain (residues 93-183) is usually disordered in the structures
    1. Streptococcus pneumoniae [TaxId: 1313] [56522] (6)
      1. 1qme picpicxrefxref
        complexed with so4
        1. region a:71-263 [42560] picpiclink
      2. 1pyy picpicxrefxref
        complexed with mpd, osu, so4; mutant
        1. region a:73-263 [95387] picpiclink
      3. 1qmf picpicxrefxref
        complexed with ces, kef
        1. region a:71-263 [42561] picpiclink
      4. 1rp5 picpicxrefxref
        the insert subdomain is fully ordered
        complexed with so4
        1. region a:64-263 [97696] picpiclink
        2. region b:64-263 [97700] picpiclink
      5. 1k25 picpicxrefxref
        mutant
        1. region a:67-263 [68035] picpiclink
        2. region b:1066-1263 [68039] picpiclink
        3. region c:2067-2263 [68043] picpiclink
        4. region d:3066-3263 [68047] picpiclink
      6. 1pmd picpicxrefxref
        CA-atoms only
        1. region a:76-263 [42562] picpiclink
  2. Penicillin binding protein 2a (PBP2A), middle domain [82824]
    the insert subdomain (residues 168-239) is fully ordered
    1. Staphylococcus aureus [TaxId: 1280] [82825] (5)
      SQ O54286 27-668
      1. 1vqq picpicxrefxref
        complexed with cd, cl; mutant
        1. region a:139-327 [114010] picpiclink
        2. region b:139-327 [114013] picpiclink
      2. 1mws picpicxrefxref
        complexed with cd, cl, nc1; mutant
        1. region a:139-327 [79593] picpiclink
        2. region b:139-327 [79596] picpiclink
      3. 1mwt picpicxrefxref
        complexed with cd, cl, pg1; mutant
        1. region a:139-327 [79599] picpiclink
        2. region b:139-327 [79602] picpiclink
      4. 1mwu picpicxrefxref
        complexed with cd, cl, mc1; mutant
        1. region a:139-327 [79605] picpiclink
        2. region b:139-327 [79608] picpiclink
      5. 1mwr picpicxrefxref
        complexed with cd, cl, mse; mutant
        1. region a:139-327 [79587] picpiclink
        2. region b:139-327 [79590] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk