Structural Classification of Proteins
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Fold: Colicin D/E5 nuclease domain

alpha(2)-beta(4)-alpha, 2 layers: alpha/beta, antiparallel beta sheet, meander

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Colicin D/E5 nuclease domain [102823]
    alpha(2)-beta(4)-alpha, 2 layers: alpha/beta, antiparallel beta sheet, meander

Superfamilies:

  1. Colicin D/E5 nuclease domain [102824] (2)
    link to SUPERFAMILY database - Superfamily
    1. Colicin D nuclease domain [102825] (1)
      1. Colicin D nuclease domain [102826]
        tRNA-specific ribonuclease
        1. Escherichia coli [TaxId: 562] [102827] (2)
          1. 1v74 picpicxref
            complexed with 1pe
            1. chain a [100442] picpiclink
          2. 1tfo picpicxref
            automatically matched to d1v74a_
            1. region a:595-697 [119233] picpiclink
    2. Colicin E5 nuclease domain [143007] (1)
      1. Colicin E5 [143008]
        1. Escherichia coli [TaxId: 562] [143009] (7)
          SQ P18000 84-177
          1. 2fhz picpicxref
            automatically matched to 2A8K A:12-105
            1. region b:12-104 [133506] picpiclink
          2. 2a8k picpic
            complexed with ca; mutant
            1. region a:12-105 [126404] picpiclink
          3. 2a8k picpic
            automatically matched to 2A8K A:12-105
            complexed with ca; mutant
            1. region b:12-105 [126405] picpiclink
          4. 2a8k picpic
            automatically matched to 2A8K A:12-105
            complexed with ca; mutant
            1. region c:12-105 [126406] picpiclink
          5. 2a8k picpic
            automatically matched to 2A8K A:12-105
            complexed with ca; mutant
            1. region d:12-105 [126407] picpiclink
          6. 2djh picpic
            automatically matched to 2A8K A:12-105
            complexed with 3pd, um3
            1. region a:20-111 [131543] picpiclink
          7. 2dfx picpicxref
            automatically matched to 2A8K A:12-105
            1. region e:20-111 [131480] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk