Structural Classification of Proteins
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Fold: Putative modulator of DNA gyrase, PmbA/TldD

consists of two different alpha+beta domains; d1: [duplication of alpha-beta(3)-alpha motif; 2 layers: a/b; antiparallel beta-sheet, order: 321456; strands 1, 2, 4 and 5 are twice longer than other secondary structures]; d2 [ complex fold; contains beta-barrel (n=5, S=10)]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Putative modulator of DNA gyrase, PmbA/TldD [111282]
    consists of two different alpha+beta domains; d1: [duplication of alpha-beta(3)-alpha motif; 2 layers: a/b; antiparallel beta-sheet, order: 321456; strands 1, 2, 4 and 5 are twice longer than other secondary structures]; d2 [ complex fold; contains beta-barrel (n=5, S=10)]

Superfamilies:

  1. Putative modulator of DNA gyrase, PmbA/TldD [111283] (1)
    link to SUPERFAMILY database - Superfamily
    1. Putative modulator of DNA gyrase, PmbA/TldD [111284] (2)
      Pfam 01523
      1. PmbA-related protein TM0727 [111285]
        1. Thermotoga maritima [TaxId: 2336] [111286] (1)
          SQ Q9WZI6; d1: 1-214; d2: 215-433
          1. 1vl4 picpic
            Structural genomics target
            1. chain a [108718] picpiclink
            2. chain b [108719] picpiclink
      2. Putative modulator of DNA gyrase BT3649 [118177]
        1. Bacteroides thetaiotaomicron [TaxId: 818] [118178] (1)
          SQ Q8A1L2
          1. 1vpb picpic
            complexed with edo
            1. chain a [113950] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk