Structural Classification of Proteins
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Superfamily: Putative modulator of DNA gyrase, PmbA/TldD

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Putative modulator of DNA gyrase, PmbA/TldD [111282]
    consists of two different alpha+beta domains; d1: [duplication of alpha-beta(3)-alpha motif; 2 layers: a/b; antiparallel beta-sheet, order: 321456; strands 1, 2, 4 and 5 are twice longer than other secondary structures]; d2 [ complex fold; contains beta-barrel (n=5, S=10)]
  4. Superfamily: Putative modulator of DNA gyrase, PmbA/TldD [111283]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Putative modulator of DNA gyrase, PmbA/TldD [111284] (2)
    Pfam 01523
    1. PmbA-related protein TM0727 [111285]
      1. Thermotoga maritima [TaxId: 2336] [111286] (1)
        SQ Q9WZI6; d1: 1-214; d2: 215-433
        1. 1vl4 picpic
          Structural genomics target
          1. chain a [108718] picpiclink
          2. chain b [108719] picpiclink
    2. Putative modulator of DNA gyrase BT3649 [118177]
      1. Bacteroides thetaiotaomicron [TaxId: 818] [118178] (1)
        SQ Q8A1L2
        1. 1vpb picpic
          complexed with edo
          1. chain a [113950] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk