Superfamily: Non-globular alpha+beta subunits of globular proteins

not a true superfamily
uperfamily

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: Non-globular alpha+beta subunits of globular proteins [56567]
   not a true fold
4. Superfamily: Non-globular alpha+beta subunits of globular proteins [56568]
   not a true superfamily
   uperfamily

Families:

1. Phycoerythrin 545 alpha-subunits [56569] (1)
   consists of a long beta-hairpin and a single alpha-helix
   1. Phycoerythrin 545 alpha-subunits [56570]
      1. Cryptophyte (Rhodomonas sp. CS24) [TaxId: 79257] [56571] (5)
         SQ P30943 38-104 ! SQ Q00433 53-128
         1. 1xg0
            complexed with cl, dbv, mo6, peb
            1. chain a [115273]
         2. 1xg0
            complexed with cl, dbv, mo6, peb
            1. chain b [115274]
         3. 1xf6
            complexed with cl, dbv, mo6, peb
            1. chain a [115240]
         4. 1xf6
            complexed with cl, dbv, mo6, peb
            1. chain b [115241]
         5. 1qgw
            complexed with cl, dbv, mo6, peb
            1. chain a [42616]
            2. chain b [42617]
2. Virulence effector SptP domain [69868] (1)
   1. Virulence effector SptP domain [69869]
      1. Salmonella typhimurium [TaxId: 90371] [69870] (1)
         1. 1jyo
            extended conformation wrapped around the secretion chaperone SicP
            1. chain e [67487]
            2. chain f [67488]
3. Ubiquinol-cytochrome c reductase 8 kDa protein [90077] (1)
   beta-hairpin and a short alpha-helix bound to the core subunits
   1. Ubiquinol-cytochrome c reductase 8 kDa protein [90078]
      1. Cow (Bos taurus) [TaxId: 9913] [90079] (14)
         SQ P13272 1-57 ! SQ P13272
         there are other PDB entries with lower resolution structures of the Ubiquinol-cytochrome c reductase complex, in which this subunit has incomplete and probably mistraced structure that is not classified in scop
         1. 1ppj
            complexed with any, azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma
            1. chain i [104265]
            2. chain v [104280]
         2. 1pp9
            complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, uq
            1. chain i [104235]
            2. chain v [104250]
         3. 2fyu
            automatically matched to d1l0li_
            complexed with fdn, fes, hem
            1. region i:1-57 [134403]
         4. 1ntm
            complexed with fes, hem
            1. chain i [92134]
         5. 1ntz
            complexed with fes, hem, uq2
            1. chain i [92162]
         6. 1l0l
            complexed with fes, fmx, hem
            1. chain i [84495]
         7. 1sqx
            automatically matched to d1l0li_
            complexed with fes, hem, sma, uq2
            1. region i:1-57 [119046]
         8. 1ntk
            complexed with ay1, fes, hem
            1. chain i [92118]
         9. 1l0n
            complexed with fes, hem
            1. chain i [84511]
         10. 1sqb
             complexed with azo, fes, hem
             1. chain i [105903]
         11. 1sqv
             automatically matched to d1l0li_
             complexed with fes, hem, uhd, uq2
             1. region i:1-57 [119031]
         12. 1sqp
             automatically matched to d1l0li_
             complexed with cdl, fes, hem, myx, pee, plx
             1. region i:1-57 [119005]
         13. 1sqq
             automatically matched to d1l0li_
             complexed with fes, hem, ost, uq2
             1. region i:1-57 [119018]
         14. 1nu1
             complexed with fes, hem, qno
             1. chain i [92180]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk