Structural Classification of Proteins
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Family: PMN2A0962/syc2379c-like

Pfam 08848; DUF1818; specific to cyanobacteria; single-chain domain made of two repeats of this structural motif

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: ssDNA-binding transcriptional regulator domain [54446]
    helix-swapped dimer of beta(4)-alpha motifs
  4. Superfamily: ssDNA-binding transcriptional regulator domain [54447]
    link to SUPERFAMILY database - Superfamily
  5. Family: PMN2A0962/syc2379c-like [143038]
    Pfam 08848; DUF1818; specific to cyanobacteria; single-chain domain made of two repeats of this structural motif

Protein Domains:

  1. Hypothetical protein PMN2A_0962 [143039]
    1. Prochlorococcus marinus [TaxId: 1219] [143040] (4)
      SQ Q46J75 1-122
      1. 2it9 picpic
        complexed with cl, edo, pge, trs
        1. region a:1-122 [137634] picpiclink
      2. 2it9 picpic
        automatically matched to 2IT9 A:1-122
        complexed with cl, edo, pge, trs
        1. region b:1-120 [137635] picpiclink
      3. 2it9 picpic
        automatically matched to 2IT9 A:1-122
        complexed with cl, edo, pge, trs
        1. region c:1-120 [137636] picpiclink
      4. 2it9 picpic
        automatically matched to 2IT9 A:1-122
        complexed with cl, edo, pge, trs
        1. region d:1-122 [137637] picpiclink
  2. Hypothetical protein syc2379_c [143041]
    1. Synechococcus sp. pcc 7942 [TaxId: 1140] [143042] (1)
      SQ Q5MZF1 1-121
      1. 2nvn picpic
        complexed with gol
        1. region a:1-121 [138633] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk